| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0027 |
|---|
| Symbol | |
|---|
| ID | 8379227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 30493 |
|---|
| End bp | 31551 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645002765 |
|---|
| Product | MMPL domain protein |
|---|
| Protein accession | YP_003160009 |
|---|
| Protein GI | 256831282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.232375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGG TCCCGCCCAA CACCACTACC CGCACTGGTT TAGCTGAGCG TCTTGTGTCG
CGGCGCGGCG CGTGGGTGTC GATTCTTCTC GCTCTCGTTG TCATGGTTGC GCTCTTTGGT
GCGTTCTCTT CGGTGGAAGC CCCACAGCGC AGCGGGAAAG CCCCCGCCTC GTCCGAATCC
GCCCAAGTCG CCGACATCCT TGCAACATTC CCGGACGCTG ACACCCAAAC AGTGCTTCTC
GTCGCCACCC GCACCGACAC CACACCCCTC ACGCCCGCTG ACCACGACAC TCTCACCAGC
ATCGCGAACA CCCTCACCAC CAACGATTCC CCCACTCCCC CTCGTGTCCT CATCAGCGAC
GACGGCAACG CCGCACTGAT CACCCACCCC ATCACCGTGG GCGACACCAA CAGCGACACC
GCCACCACAA TCAACGAACT CAGAGAGCGC ATCGGCACGC TCACCCCACC CGTACTCACC
ATCACCGTCA CCGGGGGGCC AGCCTTCGGC GCAGACATCG CATCCGCATT CGACGGCGCC
GACATCACCC TCCTACTCAT CACCATCGGC ATCGTCGCGG TCCTCCTCAT CGGAACATAC
CGCTCCCCCA TCCTGTGGCT CATCCCCCTG ACCGTGGTCG CGCTAGCCGA CGGACTCGCC
GGGCGCATCA CAGCCACCAC CGGCACCTGG CTCAACCTCG ACTTCGACGC CGGAATCATC
AGCGTCCTCA TGTTCGGTGC CAGCACCAAC TACGCCCTGC TCCTCATCTC CCGGTACCGC
GAAGAACTCA CCACCACCCC CAACCACCGC GACGCCCTCG CCACCGCGTG GCGCGCCACC
CTCCCCGCAA TCCTCGCCTC CAACGTCACC GTGGTGCTCG CGCTCCTCTC CCTCATCTTC
GCAACCATCC CCCTCACCCG CGGCCTCGGC GTACCCGCCG CCCACGGCCC AAGCACTACG
TGGTGCCCCG TTGCACCCCT CTGTGTGGAC CATTTTGATC GCGTATGGAC CACAACTATC
TGCACCCAAA CGTGCATAAT GGTCCACACG CGAACCTAG
|
|---|
| Protein sequence | MAAVPPNTTT RTGLAERLVS RRGAWVSILL ALVVMVALFG AFSSVEAPQR SGKAPASSES
AQVADILATF PDADTQTVLL VATRTDTTPL TPADHDTLTS IANTLTTNDS PTPPRVLISD
DGNAALITHP ITVGDTNSDT ATTINELRER IGTLTPPVLT ITVTGGPAFG ADIASAFDGA
DITLLLITIG IVAVLLIGTY RSPILWLIPL TVVALADGLA GRITATTGTW LNLDFDAGII
SVLMFGASTN YALLLISRYR EELTTTPNHR DALATAWRAT LPAILASNVT VVLALLSLIF
ATIPLTRGLG VPAAHGPSTT WCPVAPLCVD HFDRVWTTTI CTQTCIMVHT RT
|
|---|
| |