| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0017 |
|---|
| Symbol | |
|---|
| ID | 8379217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 19689 |
|---|
| End bp | 20516 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645002754 |
|---|
| Product | cytochrome c biogenesis protein transmembrane region |
|---|
| Protein accession | YP_003159999 |
|---|
| Protein GI | 256831272 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0785] Cytochrome c biogenesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.629435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTG GACTTCTTGC TGCTTTTCTT GGCGGCACCC TCGCGCTGTT GAGTCCGTGC
GGTGCCCTCC TCCTCCCTGC ATTTTTTTCG TCACTCGTTG GGGCGGGGGA GCGGTTGTGG
CTTCATGGTG TGGTGTTTTA CGCGGGTCTT GCCGTTGTTC TGGTTCCATT AGGGGTTGGG
GCAGGCGGGG TAGGAGCCTT GTTTGTCACG CACCGTGACA CTGTCATTGT TGTGGCGTCG
TTGGTCATGA TTGTGCTGGG TGTTGTCATG ATCGTGGGCG GCGGGTTCGA TATGACCCGC
GTTTTTCCTG GTTTTCGCCG GTTCCAGGCG TTCACCGCAC GCCGGTCGGG GGTGGTGCGG
TCACTGTTGT TGGGGATGTC TAGTGGGGTG GCCGGTTTTT GTGCTGGCCC TATTTTGGGC
GCAGTTCTCA CTCTTGCTGC CGTCCAGGAT TCCGTTGTGG CATCGGGCGC GCTGCTTGCT
GTGTACGGCG CGGGTATGGT GATTCCGCTG CTGGCTCTTG CTGTGGTGTG GAGGCGGTTG
GGGGATCGTT CTCGCCGTGT GTTGCGTGGC CGCACGGTCA CTGTGTGGGG GCGGCAGTTC
CACACCACGT CGCTCGCTAC CGGGCTTCTC ATTATTGTTG TTGGTGTTGT TTTCTGGGTC
ACCAATGGCC TGGTGTCGAT GCCCGCGCTG ATACCCACGT CGGTGCAAGC GACCTTGCAA
CAGTGGGTTT CTGGTCTCTC TGGTCCAGTT GTTGATATTG CGGTCATTCT TGTGCTTGCT
GGTGTTGCGC TCACCGTGTG GTGGGTGCGG CAGCGAAGCC GCCGTTAG
|
|---|
| Protein sequence | MDVGLLAAFL GGTLALLSPC GALLLPAFFS SLVGAGERLW LHGVVFYAGL AVVLVPLGVG
AGGVGALFVT HRDTVIVVAS LVMIVLGVVM IVGGGFDMTR VFPGFRRFQA FTARRSGVVR
SLLLGMSSGV AGFCAGPILG AVLTLAAVQD SVVASGALLA VYGAGMVIPL LALAVVWRRL
GDRSRRVLRG RTVTVWGRQF HTTSLATGLL IIVVGVVFWV TNGLVSMPAL IPTSVQATLQ
QWVSGLSGPV VDIAVILVLA GVALTVWWVR QRSRR
|
|---|
| |