Gene Dbac_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3482 
Symbol 
ID8379187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3930335 
End bp3931318 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content57% 
IMG OID645002723 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionYP_003159970 
Protein GI256831242 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCA TTACCGGCGG CGCGGGTTTC ATCGGCAGCG CCATGGTCTG GGAATTGAAC 
CAGCAGGGGT ACAGGGATAT CGTCGTGGTC GACAATCTGG CTTCCACGAA CAAATGGCGC 
AACCTGGTCG GGCTGGCCTA TCATCGGTAT ATTCAAAAAG ACAACTTCCT GGATTTGCTC 
AACACCAGAT ATATGGAAGG TCGGATCGAG GCCGTGATTC ATCTTGGAGC CTGCTCCGCG 
ACCACGGAAG CGGACTGCGA TTATCTCATC CGCAACAACT TGGAATATTC CAAGGCCATG 
TGCCGCTTCG CCCAGGAGCG CAACGCCCGT TTCATCTACG CCAGTTCCGC TGCGACCTAC 
GGGGACGGCA GCCGCGGATT CGACGACTCG GACGAGGCCA TGGAGGGTCT ACACCCTTTG 
AACATGTACG GCTATTCCAA ACACCTGTTC GATCTCTGGC TCAAGGGTGA CGGACTGCTG 
AACAAGATGG CCGGGCTCAA GTTCTTCAAT GTCTTCGGTC CCAACGAATA CCACAAGGAC 
GACATGCGCT CCGTGATCTG CAAGGCTTTC ACCCAGATCC GGCAGACGGG AAAATTGAAA 
CTCTTCAAAT CCTATCGCAA GGAATACGCC GATGGCGAGC AGCGCCGGGA TTTCGTCTAT 
ATCAAGGATT GCGTGAAGGT CATCGACTGG CTGATCAAGA ACCCGGAGGT GGGCGGCATC 
TTCAACGTGG GCACGGGCCA GGCCCGGACA TGGAACGATC TGGCGCGAGG CGTTTTCACG 
GCCATGGGCC GGGAACCGCA GATCGAATAC GTGGACATGC CGGACACCCT GCGCGGCAAG 
TACCAGTACT ACACCTGCGC CGACCTGACC AAGCTCTCGG GCCACGGCTG CGACGTGGAT 
TTCAGGCCGC TTGAGGACGG GGTCACGGAC TATGTGCAAA ATTATCTGAT GCACGGGTAT 
TCACACCTGA CGTCACGGTA CTGA
 
Protein sequence
MIIITGGAGF IGSAMVWELN QQGYRDIVVV DNLASTNKWR NLVGLAYHRY IQKDNFLDLL 
NTRYMEGRIE AVIHLGACSA TTEADCDYLI RNNLEYSKAM CRFAQERNAR FIYASSAATY 
GDGSRGFDDS DEAMEGLHPL NMYGYSKHLF DLWLKGDGLL NKMAGLKFFN VFGPNEYHKD 
DMRSVICKAF TQIRQTGKLK LFKSYRKEYA DGEQRRDFVY IKDCVKVIDW LIKNPEVGGI 
FNVGTGQART WNDLARGVFT AMGREPQIEY VDMPDTLRGK YQYYTCADLT KLSGHGCDVD 
FRPLEDGVTD YVQNYLMHGY SHLTSRY