| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3479 |
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| Symbol | |
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| ID | 8379184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3925391 |
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| End bp | 3928627 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002720 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003159967 |
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| Protein GI | 256831239 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT GTAGCACCGG CATTTCCCTT CGGACTTCCA TCCCTCTGCT TTTGGTGGGC
GTTATTCTTT TTTCCACGGT TTTGGTCAGT TGGGTGTCGT TTACCGGGAG CCGCGCAGCC
GTCGGGGATG TCGGTCTGCA GCTGCGCAAG GAGGTTTCGC ATCGCATTTC GGAGCATCTG
CTCGAATTTC TTCGCCTGCC TCACGAGATC AACCGCCGCA ACGCGCTGGC GTTGCAGAAT
GGACTCGTAC CCGCCGCTGA TCCGCAGGGA TTGATTTCGC GGTTCGCCGA GCAGGTGGAT
CTTTTTCCTT CGGTTTCAAG CATCTATTTC GGCAATGCAC AGGGCGGGCT TGCCAATAGC
GGCCGGGATC CGGAGCGCAA CTCCCGATAT TCAATCCGCA CGGATGATTT CAAAGCCGGA
ACGTTTCGCA GATACGCCAT GGACTCCCGA GGCGTGCAGG GCGAGGAGCT GTCCAGCGCG
GCAGGCTTCG ACGCCAGGAC CCGGCCGTGG TACACGAAGG CTCTGTCCGC GAACGGGCCG
GTCTGGAGCG ACGTTTACGT GCTGTTTACC GGACAGGATC TGGCCCTTGC CGCCAGCCGC
CCCGTGTACG ACAGCCACGG CACGGCCCTG GGCGTGGTCT CCGTGGATGT GTTCCTGTCC
CAGCTCACGA GGTTTTTGCA GCAACTGCGC ATCGGCAGCA CCGGAAAGGC GTTCATTCTG
GATCGTACCG GGGTGTTGGT GGCCGGTTCG GGCACGGAGC CGCTCTTCGT TCCGGCCCGG
GGCGGGAATC CGGGCCGGCG GATATTGGGA ACGCAGAGCC GGGATCTGCT GGTACATGCC
GCGTCGCAGG CCCTGTCTTC ACGATTCGGC AATCTTGAGA AGATCAGCGC AGAGCACCAT
TTTGAATTTT CGGGCCTGGG CCAGCACCTT CTGGTCACGG TTTCTCCGTT GCGCGATCCC
CTCGGCATTG ATTGGCTTAT CGTCGTTGCC GTGCCGGAAT CCGACTTCAT GGCCAGGATC
GGGGACAATG CCCGCGTCAC CGCGATTATC ATGCTTGGAG TCCTTGCGTT GTCGCTTCTG
GTCGGAACGC TGCTGGCCCG CAGGATCGTC AAGCCCATCT CCGGGTTGGA AGAGGCGGCG
GGCCGTTTGG CCGGAGATTC GAGTCTGGAA ATGATTGGTG AGACTTCGAG GTTTGTCGAG
GTCCAGAGCC TGACCAGATC ATTCAATCGG ATGGCGCGGC AGCTTTCCCA GACCATGCAG
GGCATGAAGC GGGAACTGAC GGAGCGGCAA TGGGCCGAGG CGGCCCTTGG CGAGAGCGAA
TCCCGGTATC GAGCGCTGGT CGAACTGGCC GTGGACGGCA TTCTGCTCGG CTCGCACGAG
GGCGTCATCA CCGGCGCCAA CGAATGCATG TGCGACCTGA CCGGGCTCAC GCGCGAGGAC
ATGCTTGGCA TGCACATCAG CGCCCTGCCG TTCAAACCGG AGAGCCTGGA GCGTGAGCCG
TTTCGTTTCG AGCAGCTGGA ACACGGGGAC ATCGTGCAGA AAGAGCGCGT TCTGATTCGT
CCTGATGGGA CCGAGATCCT GGTGGAGATG CGCAGCAAGA TGATGCCGGA CGGAACATAT
CAGTCCATTT TCCGCGATGT CACGGCGCGC AGAAAGGCGG AGGCGGCCTT GCGCGAAAGC
GAGGAGCGCC TGCGCATGCT CAGTGACAAT CTGCCCGGCG GGCTCGTGTA TCAGATCGAG
GTGGGTCTGG ATGGCCGGGA GCGCAGATTT ACCTATATCA GCGGCGGCGT GGAATCTCTG
CATGGCCTGA GCGTGCAAGA CGTGCTGGAC GACGCGTCCG TGCTCTATGC GCAGCTTCCG
GAAAAGGACG GGGAGCAGTT GGCTGAGCGG GAGGCCGAGG CTTTGTCGGC CATGTCCCTT
TTTCATGCGG AGGCGCGCTT TCGTCTGGCC TCGGGCAAAG TCCGCTGGAG CTATCTGGCC
TCCGCTCCGA GACGGATTGG TGATCGCGTG GTCTGGGACG GGGTCGAGAT AGACATCACA
GAGCTCAAAA AGACCGAAGC CGCCCTGCTC GAAGCCAAGG AGACCGCCGA GACGGCCAAC
AGGGTCAAAA CGGAGTTTCT GGCCAACATG AGTCATGAGA TCCGCACGCC CCTCAACGGC
ATTCTCGGCA TGATGCAGCT GTTGCGACAG ACCAGCCTGG AACCGGAGCA GGAGAAGTAT
GTGGAGCTTT CCATCACTTC GGCCGCGCGG CTGACCCGCC TGCTGGCCGA CATCCTGGAT
ATCTCCCGCA TCGAAGCCGG GAAAATGAGC CTCTTTAACG CGCCCTTCAG CGCTGCCGAG
CTTGTCGATT CGGTGGTGGA GCTTTTTGCG GTTCCCGCCC GGGAAAAGGG CCTGCGGCTT
CGTTGCGCCA TTCATCCCGG CCTGCCGCCC CTGCTTGTCG GCGATGAGGC CCGGGTGCGC
CAGATCCTTT TCAACCTGGT CGGCAACGCC CTCAAGTATA CGGAGCAGGG GGATATAACC
CTGGAGCTGT TCGCGCGAGA CGCGGACCTG TGCCGGTCCG AGTGCATGTG CATACGTGTC
GTCGATACCG GCGTGGGCAT CCCCGCGCAC ATGCTTTCCG GCGTGTTCGA GCCCTTTCGG
CAGGTGGAGG GTTCCCATAC GCGCAGTTAC GAGGGCGCGG GGCTTGGGCT GGCCATTGTG
CAGCGGCTGG TGGAGCTTAT GCAGGGCGAG ATTTCCGTGC AGAGCGAGCC CGGCGCGGGC
ACTGCCGTTC TGGTCAGTCT GCCCCTGCGC GCCGCCAGCG AGTATTGCAT CCCACAGGAC
GTCGCGGAGA GCGTGGCGTT GGAGGCCGGA CCGGGCCTTC GCCTTCTGCT GGCCGAAGAT
GAAGCCATCA ATCAGTTGGC CATGCGCACT CTGCTGGAAA AAGCGGGGCA CCGGGTGTCC
ATCGCGCAGA ACGGCCAGGA GGTCCTGGAT CTTTTGCGGG AAGAGGATTT CGATTGCGTT
CTCATGGACG TGCAGATGCC GGTCATGAGC GGCATCGAAG CCACCCGCCG CATTCGCACC
TCTCCGGAAC TGGCGGCCAG GAAGGACGTA CCCATCATCG CCCTGACCGC CCACGCAATG
AGCGGGGATC GCGAGTCGTT TCTGCAGGCC GGGATGGACG ACTACCTGTC CAAGCCGGTC
GGCCTGGACG ATCTGGTCAA GGCCATCGCG AAGCTTAAAA GCAGGTCAAG CGCATAG
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| Protein sequence | MRFCSTGISL RTSIPLLLVG VILFSTVLVS WVSFTGSRAA VGDVGLQLRK EVSHRISEHL
LEFLRLPHEI NRRNALALQN GLVPAADPQG LISRFAEQVD LFPSVSSIYF GNAQGGLANS
GRDPERNSRY SIRTDDFKAG TFRRYAMDSR GVQGEELSSA AGFDARTRPW YTKALSANGP
VWSDVYVLFT GQDLALAASR PVYDSHGTAL GVVSVDVFLS QLTRFLQQLR IGSTGKAFIL
DRTGVLVAGS GTEPLFVPAR GGNPGRRILG TQSRDLLVHA ASQALSSRFG NLEKISAEHH
FEFSGLGQHL LVTVSPLRDP LGIDWLIVVA VPESDFMARI GDNARVTAII MLGVLALSLL
VGTLLARRIV KPISGLEEAA GRLAGDSSLE MIGETSRFVE VQSLTRSFNR MARQLSQTMQ
GMKRELTERQ WAEAALGESE SRYRALVELA VDGILLGSHE GVITGANECM CDLTGLTRED
MLGMHISALP FKPESLEREP FRFEQLEHGD IVQKERVLIR PDGTEILVEM RSKMMPDGTY
QSIFRDVTAR RKAEAALRES EERLRMLSDN LPGGLVYQIE VGLDGRERRF TYISGGVESL
HGLSVQDVLD DASVLYAQLP EKDGEQLAER EAEALSAMSL FHAEARFRLA SGKVRWSYLA
SAPRRIGDRV VWDGVEIDIT ELKKTEAALL EAKETAETAN RVKTEFLANM SHEIRTPLNG
ILGMMQLLRQ TSLEPEQEKY VELSITSAAR LTRLLADILD ISRIEAGKMS LFNAPFSAAE
LVDSVVELFA VPAREKGLRL RCAIHPGLPP LLVGDEARVR QILFNLVGNA LKYTEQGDIT
LELFARDADL CRSECMCIRV VDTGVGIPAH MLSGVFEPFR QVEGSHTRSY EGAGLGLAIV
QRLVELMQGE ISVQSEPGAG TAVLVSLPLR AASEYCIPQD VAESVALEAG PGLRLLLAED
EAINQLAMRT LLEKAGHRVS IAQNGQEVLD LLREEDFDCV LMDVQMPVMS GIEATRRIRT
SPELAARKDV PIIALTAHAM SGDRESFLQA GMDDYLSKPV GLDDLVKAIA KLKSRSSA
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