| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3462 |
|---|
| Symbol | |
|---|
| ID | 8379167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3910836 |
|---|
| End bp | 3911696 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645002703 |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_003159950 |
|---|
| Protein GI | 256831222 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA TCATCGCGGA GACAGCGGGA TTTTGCATGG GAGTCGACAT GGCGCTGCAC
AAGCTGGACA ATGCCGTGTC CATCCCTCCC CAAGACGCGC AGCATATATA TACCCTGGGA
CCCATCATCC ATAACCCGCA GGTGCTGGCC AGATACAAGG GCCTGGGAGT GTTGCAGACC
GACGGGACAA AGCCCCTGCA GACAGGGGAC GTGGTCGTCA TTAGGGCCCA CGGGATCCCC
AGGCACATAC AGACGAGTCT GGAAGGACAG AACATAACTG TGGTCGATGC CACATGTCCG
AAAGTCAAAA AAGCTCAGAT CCTCATTCAA AGACAAGCCG ACCAGAATAA ACACCTGCTT
CTTTTCGGAG AGCGCGATCA CCCCGAAGTG CAAGGCCTGG TGAGCTACGC CCCGAAGCAC
ACAATTTTTG AAAGCCTTGA AGAATTGCAG GCGTACGAAG TCGATCCCGC GCAGACCTAT
TTTCTGGCGG CGCAGACCAC GCAGGACAGG GAGTCCTTCG ATACCATTCG CGAATATCTG
AGAGCAAACG TAGATGCCGC TATGACCATT CTCGACACGA TCTGCATGGC AACCAAGGAC
AGACAGGAAG AAGTGCGCGA GTTGTCCCGC AAGGTTCAGG CCATAGTCAT CGTGGGAGGA
AAAAACAGCG GAAACACCCG GCGATTGGCT CAAATTGCGC AAGAGTCAGG AATATTCGCG
ATCCACGTCG AAACCGCAGA AGAACTCCCA CTGGAGGAAC TTGCCGCGTT TACACGCATC
GGACTGACAG CAGGAGCCTC CACACCACCA TGGATAATCC AGAATGTAGC CCAGACACTC
CGCCTCGCTT TTCCGGATTG A
|
|---|
| Protein sequence | MELIIAETAG FCMGVDMALH KLDNAVSIPP QDAQHIYTLG PIIHNPQVLA RYKGLGVLQT
DGTKPLQTGD VVVIRAHGIP RHIQTSLEGQ NITVVDATCP KVKKAQILIQ RQADQNKHLL
LFGERDHPEV QGLVSYAPKH TIFESLEELQ AYEVDPAQTY FLAAQTTQDR ESFDTIREYL
RANVDAAMTI LDTICMATKD RQEEVRELSR KVQAIVIVGG KNSGNTRRLA QIAQESGIFA
IHVETAEELP LEELAAFTRI GLTAGASTPP WIIQNVAQTL RLAFPD
|
|---|
| |