| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3444 |
|---|
| Symbol | |
|---|
| ID | 8379145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3885249 |
|---|
| End bp | 3888299 |
|---|
| Gene Length | 3051 bp |
|---|
| Protein Length | 1016 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645002681 |
|---|
| Product | pyruvate phosphate dikinase PEP/pyruvate- binding |
|---|
| Protein accession | YP_003159932 |
|---|
| Protein GI | 256831204 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATA CGCCCGACCT GCATCTGGTG GCCCAGGATT CGGAATTTCG GAAATTCCAT
GACCTCATGG CCAGGAAAGT CCAGAATATT CTGCTCGTGT CCACGGCTTA CGATGCCTGG
GTCATGGAGG AGGACTGCAA GCTCTCCGAA CGCATCGTGT CCGAATACCA GGGCCTGAAC
CTGAGCCGCC CGCCCCGTCT GACCTGGGCC TCAAGCGCCG AGGAGGCGCT GGCTTTTTTG
GCGCAGCGCC CGTTCGAACT CATTATCCTC ATGCCGCAAT TGGCCGAGCG CGAGGCCCTG
ACCCTGGGGC AGAGGATCAA GGAGCTCAGC CTTGGCATCC CCGTTTATCT GCTGACCCAC
CGCGAAGTGT TCCTGCCCGG GGAAACCCCG CCCGAAGGCA TTGACCGCCA GTTTGTGTGG
ACCGGCAACG CCGACCTGCT GGTCGCCCTG GTCAAGAACG CCGAAGACGC CATGAACGTC
GATTTCGACA CGAAAAGCGT CGGCATCCGG GTCATCATCG TGGTCGAGGA CTCCCCTCGT
TATCAGTCCT GCCTGCTGCC CATCCTGTAT CGCGAGCTGG TGGTCCAGAC CCAGGATGTC
ATCCGCGAAG GGCTGAATCA GGAGCACCGC CTGTTGACCA TGAGGTGCCG GCCCAAGATT
CTCTTGACCG ATAATTATGA GGACGCGCTG GCTCTGTTCC TGAAATTCGA GCCGTATGTG
TTGGGGGTGA TCTCCGATGT GCGCTTTCCC CGTGGCGGCA AGCTCGATGC TTCGGCCGGC
GTCGATTTGC TCGGGGCCAT CAAGGCTCAG CGTTTCGATA TCCCGCTGCT GCTGATGAGC
AACGAGCCGG ACAACGCCCG CAGGGCCCGG GAGATTCCGG CCAGCTTCGT GGACAAGAAT
TCTCCCTGCC TGCTTGCGGA TGTGCGCGGT TTCGTGCTGG AGCGTCTGGG GTTCGGGGAT
TTCATCTTTC GCGGAACGCA AGGAGAGGAA ATCTCTCGGG CCGGAAGCCT CTATGCGCTT
GAGGAACGGC TGAGGACCAT TCCTGCCGAG GCTCTTGTCA ACCATTCTCG TCACAACGAT
TTTTCGCGCT GGTTTTTTGC ACGGACCGAG TTTGAGCTGG CCAACCACCT GCGCCCCTTG
AGCGAAACAG ATTTCGCGTC ACCGGAGCTC TTGCGGGCCG GAGTGATCGA GATGATCCGG
GCCAGGCGGC AGCAGCGGCA AAAGGGGATC GTGGCAAATT TCAACGCCAA GGATTTCGAT
CCGACCACGG ACTTCTTCAA GATCGGCAAG GGTTCCATGG GTGGCAAGGC GCGTGGGCTG
GCGTTTTTGT TTTCCATCCT GAACAGGATT CCGGCCCTCG CGGAAAAATA TCCCGGCGTG
GATTTTTCCA TGCCGAGGAC CCTGGGCATT TCGACCGAAG GTTTTGATTC TTTTGTAAAA
ATCAATGATT TAGGGTATTT GTCTGGAGTT GATCTTGCGG ACGACGAGGT CTTGAAGATC
GTTGAAAAGG CCCGTTTTCC CAAGTGGCTG AGCCATCAGC TTAAAGCCTA TCTTTCCCAG
GTCCACCATC CTCTGGCCGT GCGCTCGTCA AGCCTCCTCG AAGACGCCCA GTATCAGGCC
TACGCTGGAC TGTACTCCAC GATTATGGTG CCCAACAATC ATCCAGACCC GAATGTGCGG
CTGGCGGAAT TGATCCTGGC CATCAAGCAG GTCTACGCCT CCACGTTTTA TCAGGCGCCC
AAAGCCTTTT CAAGGCGGGT CAACCAGCGC ACCGATGAGG AGAAAATGGG CGTGCTGGTG
CAGCAGGTCA TCGGGGATGA TTACGGCGGG TATTTTTATC CGGCCATTTC CGGCGTGGCA
CAGTCATACA ATTACTATCC GTTCGGACGC ATGAAGCCCG AGGACGGGGT GGCCACCATT
GCTTTCGGAT TCGGCAAGAT CGTAGTCGAT GGTGGGCAGA CCCTGCGCTT TTCGCCCAGA
TATCCGAACA TCCTGCCGCA ATGTCCGACG GTGGAGCTGG CTTTGCGCAC GGCCCAAACA
GAGTTCTACA GCCTGCCTCT GGAGCATTGG CCCTGGGCGC GCACGGATTT TTCCCTATCC
CGCCGCAACA TCACCGAAGC CGAGGAAAAG GGGCCGCTGG CCCTGGTAGC TTCGACCTTT
CTCCCGGAAG AGGGGCGCAT TCGTGATACG GCGTCCATTC CCGATCGGCC GCGCGTTCTG
CTTTTCGCTC CGGTATTGAA GCACAAGATC CTGCCGCTGG CAGAAATCCT GGCAGATGTC
ATGGGCATCA CGGAATCGGC CATGGGGTGC CCCGTGGAGA TAGAATTCGC CTGCAATCTC
TACCGGGACA AGCAGCACAG GCCCGTGTTT TCCCTGCTGC AGTTGCGTCC CATGTCCGCC
CGGGCCGATC TTAACCGGGT CACCATCACC GAGCATGATC GCGAGCAGGC CTTCTGCCTG
TCTTCCCACG CTCTGGGCAA TGCTGAGAAA TGTGATGTGC GCGATATCGT TTTTGTGCGG
CCCGATGCCT TTGAGGTCGA AAAAACCGTG CAGATCGCAG GGGAGATCGG ACGCATCAAT
GCCGCGCTCG TGGCCCAGGG GCGCAAATAT CTGCTGGTGG GCCCAGGGCG CTGGGGTACG
GCAGACCGCT GGCTGGGCAT TCCCGTGACT TGGAATGACA TCTGCGGAGT CTCGGCCATC
GTCGAGACCG CTTCGGCCCA GCTGCGCGTG GAGCCATCCC AAGGCTCTCA TTTTTTTCAC
AACATAACCA CTCTCGGGAT CAATTACATT ATGATGTCGG GCAAGGAAGG CGAGCGTTTC
GACTGGGAAT GGCTGGAGGG GCACGATGCC GTGGCCAGGG ACGAGCATGT GGTTCACGTG
CGCCTGTCTG CGCCGATGGT CATCAAGGTC GATGGCCGCA GCTCGCACTG CGCGATTATT
CCGGGGGACG AAATGGCGCG ATGCCTGGAG GTGAACACGG CTCCGCCGGG CACCGGGTGC
TGCGCTCCGG GCTGCGAGGG AGCAGGTTCG CCCGGGCAGT GCGCACTATG A
|
|---|
| Protein sequence | MPNTPDLHLV AQDSEFRKFH DLMARKVQNI LLVSTAYDAW VMEEDCKLSE RIVSEYQGLN
LSRPPRLTWA SSAEEALAFL AQRPFELIIL MPQLAEREAL TLGQRIKELS LGIPVYLLTH
REVFLPGETP PEGIDRQFVW TGNADLLVAL VKNAEDAMNV DFDTKSVGIR VIIVVEDSPR
YQSCLLPILY RELVVQTQDV IREGLNQEHR LLTMRCRPKI LLTDNYEDAL ALFLKFEPYV
LGVISDVRFP RGGKLDASAG VDLLGAIKAQ RFDIPLLLMS NEPDNARRAR EIPASFVDKN
SPCLLADVRG FVLERLGFGD FIFRGTQGEE ISRAGSLYAL EERLRTIPAE ALVNHSRHND
FSRWFFARTE FELANHLRPL SETDFASPEL LRAGVIEMIR ARRQQRQKGI VANFNAKDFD
PTTDFFKIGK GSMGGKARGL AFLFSILNRI PALAEKYPGV DFSMPRTLGI STEGFDSFVK
INDLGYLSGV DLADDEVLKI VEKARFPKWL SHQLKAYLSQ VHHPLAVRSS SLLEDAQYQA
YAGLYSTIMV PNNHPDPNVR LAELILAIKQ VYASTFYQAP KAFSRRVNQR TDEEKMGVLV
QQVIGDDYGG YFYPAISGVA QSYNYYPFGR MKPEDGVATI AFGFGKIVVD GGQTLRFSPR
YPNILPQCPT VELALRTAQT EFYSLPLEHW PWARTDFSLS RRNITEAEEK GPLALVASTF
LPEEGRIRDT ASIPDRPRVL LFAPVLKHKI LPLAEILADV MGITESAMGC PVEIEFACNL
YRDKQHRPVF SLLQLRPMSA RADLNRVTIT EHDREQAFCL SSHALGNAEK CDVRDIVFVR
PDAFEVEKTV QIAGEIGRIN AALVAQGRKY LLVGPGRWGT ADRWLGIPVT WNDICGVSAI
VETASAQLRV EPSQGSHFFH NITTLGINYI MMSGKEGERF DWEWLEGHDA VARDEHVVHV
RLSAPMVIKV DGRSSHCAII PGDEMARCLE VNTAPPGTGC CAPGCEGAGS PGQCAL
|
|---|
| |