Gene Dbac_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3435 
Symbol 
ID8379136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3876132 
End bp3876557 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID645002672 
Producthypothetical protein 
Protein accessionYP_003159923 
Protein GI256831195 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAAG GCTACACGCT CCTCGAAACC CTGGTGGTCC TGGCCATCGC GGCCGTGTTG 
GCCGGCATCT GCGGCACGAC GCTGCTCGCC GCCCTGCCGG GAGCCGAAGT CAACCGCGCG
GCCAGGACCA TTGTCAGCAT GTGCAGACAT GCCAGATTTG AGGCCATCAA GCGAAACGTA
CAAATCCGGT TTGAATGCGA CACGGAGCAG AATGCCTGCG AAATCAGGGT GCGCGGCGAC
AACACCCTGC TATGGCGCTT TGATCTCGCG GACTTGAGAA ACCAGGTCAC CCACGCAAAA
TCCTTCACCA CCCATTTCAA TGGTTTCGGA AGGGCTTCCG TGGGCGGGTC CGTCGTCATC
CAAAACAACA CCGGACTGTC GCGCACGGTG AAGGTACGGC CATCGGGCAG CGTGGTCACG
GAGTGA
 
Protein sequence
MNKGYTLLET LVVLAIAAVL AGICGTTLLA ALPGAEVNRA ARTIVSMCRH ARFEAIKRNV 
QIRFECDTEQ NACEIRVRGD NTLLWRFDLA DLRNQVTHAK SFTTHFNGFG RASVGGSVVI
QNNTGLSRTV KVRPSGSVVT E