| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3425 |
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| Symbol | |
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| ID | 8379126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3863786 |
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| End bp | 3867652 |
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| Gene Length | 3867 bp |
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| Protein Length | 1288 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645002662 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
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| Protein accession | YP_003159913 |
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| Protein GI | 256831185 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAT ATTATCAGGA TTTTTTTATT TCAAATCAAG GGAGCGCTAA AATGAAAAGC
TCGCGGGTAC CACTGCTTAT TTTTTTGTTT ATACTTTATT TTGCGAGCAT TGCTTTAGCA
GCGCAATCAA TAACAGCAGA GCAATTTAGC TGCAACAATT ATGCACACAT ACCTCCTTTT
TTATCAGACG CTGTTAAACC TTCAACAACA CTCATCGTCG ATTCATCAGG AAGCATGAAC
GAGCATGCAT ATCAGGAAGA AGCGGTATAC TGGGGAAACG ACAACACAAG AGCATATACA
GGATACAACG CTTCCAACGA ATATTACGGC TACTTTGAAC CCAGCGCAAA TTATACCTAC
GATGAGACCG CTGATTATTT TAAACCCGAC ACTTCTGGCA AATGGAATGG CAATTTCATG
AACTGGGTTT CTATGCACAG AACAGACATC GTCAGAAAAG TCCTCACGGG TGGAGCATAC
AACAACGCCA CAAACACATA TTTAGTCTCT AAAACTGACG GCGGAAACAG CAGAGGCATG
TACCACGTAT TCAACGCAAC AGGAAAAAAT GTAACTCCGT ATTCTGAACC TCTTGGATTT
AAGCAAACCG CTAGCGATAA CTACATAACT CTCTACAAAG CTACACCACC CAATACAACA
AGCAAAATAT GGTCAATAGG AAGCGAAGTA GGAAAATTCC AACTTAAAAT TTACTCTGAA
AAAAAATACG GACTTCTCCA CCGTTTCGGC TACAGAATGA GGCTAGCTTT ATTTCGATAC
GATGACGACG TCACTAAAAA AGACATATCT GGATATGAAG ATGGTGGCGA AATTCTGAAT
TACATGACAT CGGACAGCAC AGAGATAGAC GACATAATCA ACAACATTGA CGAAATAGCC
GTCAACAGCT GGACACCCCT AGCTGAAACG TTGTATACTG CATGTGGATA TATACGCCAA
GACAACAATC TTTCCAATGA AATTGGGCCA CGATACGAAA CAGATGCATA CAATGTTCAG
AGCGGGGATT CATACCCAAG CCCGTATTAC TTTGCTGATA TTGGGGATGA AATCTGGTGC
TCCAATCAAA ATGTCATTCT CATTACCGAC GGCGAATCTA CCCAAGATCA AAACTTACCA
GAATTCATCA AAGACGGCTT TGACGGTGCC AATAACGACA ACGTCACATA TCCAAACGAA
GGCTCTGCCT TTCTCGACAA CGTCGCGTAC TGGGCACATA CGACGGACAT GCGTGACGAC
CTTGAAGGAA ACCAGACTGT CGATCTCTAT ACAATCTTTG CCTTCGGATC CGGAAGCCAA
CTCCTGAAAG AAGCCGCCAA ATGGGGAGGT TTCAAGGACA ACGATGGCAA TGGCGAACCA
ACCAACTCAA CTGAATACGA CACCAGCCCA AAAGACGGAA TCCCTGACAA CTATTTCGAA
GCTGCCACTG GCGCCGAACT TGAAAACGCG CTCATCACAG CATTCAGCAG CATACTGAAC
CGCGTATCCT CCGGGTCGGC AGCATCGGTC GTCTCCACAT CCCGAAAAGG GGCTGGGCTT
CTATACCAAG CGGTCTTCTG GCCTCAACGC GACAAGACAA CTTGGACCGG CGATGTTTAC
GCTTATTGGC TGGATAATGA CGGAATCATG CATGAAGATA ACGGCACATC AGAGCATGTT
CTCGACCCCG GAGACGCCAA GGTCACCATT TGGTATGATG AAAGCGACAA GGAATCCAAG
GCTTGCTCAG GGGGCGAAGT GGTCAACGGG ACCTGCACTG GAGAAGAAAA GAAGTTGAGT
TCTGTAAAGC ACGTTTGGAG CGCCTCCAGA TGGCTAAACA AGATGTCGGA TTCAGAAGCA
TTAATACAGC GTTCAAATTA CAACTCTACA AGCGGCGAGG ACAAATCACT ACGCTACATT
TTTACCTGGA ATGATGATGG AGATGGAATA ATAGACTACG ATAACGAAGT TGTCGATTTC
ATCCCAGGCA ACGTAAATTC CACGCTATGT CCAGCTTCTG TAGTAAATTG GATCAGAGGC
GAAGATAACA CAGCCTTGAG ATCCCGCGAA ATAAATGTCG ACAGAAATTT TGACGGCGAA
CCTGAAACAC CTGAAACATG GCGCATGGGC GACATAATCA ATTCTTCACC GACTGTCGTC
TCCGCACCGG CAGAAAATTA CGATTTATAC TGGAATGATT CAACATATAC AGAATTTTAT
AAGCAGTACA AAAATAGACG CGTCATGGTC TATTTTGGCG CTAATGACGG GATGCTGCAC
GCCGTTAACA GCGGGTTTTA CAGCGAAAAA ACAGGTGGAT ACTATACCAA CATAGAGAGT
AACGGCACTC TTTCCACAAA TGGCGGTTTT GAGCTTGGCA CTGAAATGTG GGCGTATGTT
CCGTACAATC TCTTGCCACA CCTGTCATGC CTGACAAACC CAAATTATCA GCACCAATAT
TACGTGGATT TGAAACCTAG GGTGTTTGAC GCGAAAGTCT TTTACCCAGA CAAGGATCAC
CCCGAGGGAT GGGGGACCAT CCTCGTATGC GGATTCAATT TCGGCGGCGA TGGTCAACAA
AACCTTGCCG TGGGCACAAA CTACTTTGGC TCATCTTTTG TCATGTTTGA CGTGACAAAT
CCGGAGGTTC CGCCGGTACT CTTGGGGGAA TTAACTTTCG ATGGCACATA CACCTTGGGC
TACTCAGTGA ACCAACCGAC GCTTGTCGCA GTCAACGGAA CCGACGGGGA ACGATATTGG
TACATGTTGT TTGGCACCGG CCCACTTGAA ACTGATGGAC AAAGCAATCA GAAGGCACAG
GTCATTGTCA TTCCGATGGC GGCAATCATC GACGCAGAAA AAGGTCCTAA CATACCCACC
TCGTTTTCGT TGCGCATGGA TGCAAGCATC GCCAAACCGT CAAGCAGCGA TAAAGGAATC
CTTTCCCTTT CGGACTCGGA CAGCGCGATG GGAACAGGCT TTGTATCCGT TGATTACGAT
TTCGATTTCT TCATTGACAT GATGTATTAC GGCACAGTGG TCACCCCTAA CAAGGGAGAC
TTCACAGGCG GAGTACACAG GTTGAAAGTC GAAGCGGAAC CTGATCCCAG CAAATGGGAA
CGCAAAGAGA TGACTGACAC CGGAGGGCCA ATGACCGGCG CTCCCAACGT CGGCTTCAAA
GACAAGAATG TTTGGGTATA CTTCGGTACG GGCAAGTTCT GGGACACTTT GGATAAAACT
GACCTAAGAA CCCAGTGGAT GTACGGCATC ATGGAGCCCA AAAAAACCGA CAGTTCCGCA
TACAACTTTA GCACAATCCC CCCAGGAAAT TTGTTCGATG TTACGGGAAT TCAAGTTTTG
AACGATGGCT CAGGACTTCT TGAATGCGAC GACAGCCTTG GAGACTGTCC ACCATCAGAC
GTAACAACTG TAGAGGAACT GGCTGATTAT ATCCGAGATA CTCCAAACAT AGATGGATGG
AGACGGGCGA TGAACAATAG CACCGGCGAA CGTGTTGTCG GGCAACCAAC ACTTTTTGGC
GGCCTCACAA ATTTTACGAC GTTCACCCCA TCAAGCGACT ATTGCACAGC GGAGGGAACT
AGCAAACTAT ATGCGCTCTA TTACCGAACC GGGACAGCGT GGAAAGAAAA CGTTTTCGGA
GATGGAGGGG GAAAATACGT ACCGTTCATT GTCGACCTGG GGCAAGGCAT GGGTGTTTCT
CCCAGCCTGC ACCTTGGCAG CGAGGAAGGC GTAAGAGCCT TCGTGCAGAC AAGCACCGGG
AGCATCATCG AAATCCATCA GCCAAACCTG CCGATACCTA ACGTCAAGTC CGGCCGCGGC
GGATGGCATA CCCTTGAAGT GGATTAA
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| Protein sequence | MKKYYQDFFI SNQGSAKMKS SRVPLLIFLF ILYFASIALA AQSITAEQFS CNNYAHIPPF
LSDAVKPSTT LIVDSSGSMN EHAYQEEAVY WGNDNTRAYT GYNASNEYYG YFEPSANYTY
DETADYFKPD TSGKWNGNFM NWVSMHRTDI VRKVLTGGAY NNATNTYLVS KTDGGNSRGM
YHVFNATGKN VTPYSEPLGF KQTASDNYIT LYKATPPNTT SKIWSIGSEV GKFQLKIYSE
KKYGLLHRFG YRMRLALFRY DDDVTKKDIS GYEDGGEILN YMTSDSTEID DIINNIDEIA
VNSWTPLAET LYTACGYIRQ DNNLSNEIGP RYETDAYNVQ SGDSYPSPYY FADIGDEIWC
SNQNVILITD GESTQDQNLP EFIKDGFDGA NNDNVTYPNE GSAFLDNVAY WAHTTDMRDD
LEGNQTVDLY TIFAFGSGSQ LLKEAAKWGG FKDNDGNGEP TNSTEYDTSP KDGIPDNYFE
AATGAELENA LITAFSSILN RVSSGSAASV VSTSRKGAGL LYQAVFWPQR DKTTWTGDVY
AYWLDNDGIM HEDNGTSEHV LDPGDAKVTI WYDESDKESK ACSGGEVVNG TCTGEEKKLS
SVKHVWSASR WLNKMSDSEA LIQRSNYNST SGEDKSLRYI FTWNDDGDGI IDYDNEVVDF
IPGNVNSTLC PASVVNWIRG EDNTALRSRE INVDRNFDGE PETPETWRMG DIINSSPTVV
SAPAENYDLY WNDSTYTEFY KQYKNRRVMV YFGANDGMLH AVNSGFYSEK TGGYYTNIES
NGTLSTNGGF ELGTEMWAYV PYNLLPHLSC LTNPNYQHQY YVDLKPRVFD AKVFYPDKDH
PEGWGTILVC GFNFGGDGQQ NLAVGTNYFG SSFVMFDVTN PEVPPVLLGE LTFDGTYTLG
YSVNQPTLVA VNGTDGERYW YMLFGTGPLE TDGQSNQKAQ VIVIPMAAII DAEKGPNIPT
SFSLRMDASI AKPSSSDKGI LSLSDSDSAM GTGFVSVDYD FDFFIDMMYY GTVVTPNKGD
FTGGVHRLKV EAEPDPSKWE RKEMTDTGGP MTGAPNVGFK DKNVWVYFGT GKFWDTLDKT
DLRTQWMYGI MEPKKTDSSA YNFSTIPPGN LFDVTGIQVL NDGSGLLECD DSLGDCPPSD
VTTVEELADY IRDTPNIDGW RRAMNNSTGE RVVGQPTLFG GLTNFTTFTP SSDYCTAEGT
SKLYALYYRT GTAWKENVFG DGGGKYVPFI VDLGQGMGVS PSLHLGSEEG VRAFVQTSTG
SIIEIHQPNL PIPNVKSGRG GWHTLEVD
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