Gene Dbac_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3421 
Symbol 
ID8379122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3860199 
End bp3860837 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID645002658 
Productthiamine pyrophosphokinase 
Protein accessionYP_003159909 
Protein GI256831181 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTGGG TTCTTTTGGC CAACGGGCCC CTGACTCTCT CGCCGGTCAT CAGGCAGGTC 
ATTTCCACCG CCGAAAGGCT GATCGGGGTT GACGGCGGCA GCAGGCATTT ACGCGCCATG
GGAATGCTTC CGCATCTGGC CGTGGGCGAC ATGGACTCCA TTTCCGAAGA ACTGCTTCAG
GAATACCGAC AGGCGGACGT GGAATTGCAC CTGCATCCAC CCAAAAAAGA CGCCACGGAC
CTGGAACTGG CGCTCGAACT GGCCCTCACG CGCGGCGCGT CCCGCATCTC CATTCTGGGA
GGCACCGGGG GCAGGCTCGA CCACACCCTG GGCAACATCT TTCTCCTGTC ACGCTGCCTG
CCCGCAGGAA TCCCGGCCTG CATCATGGAC CAGGAACAAT GCGTGCACCT CACGGATCAA
TCCCTGACCT TGAGCGGCGC AGTGGGCGAT ACCCTGTCAC TGCTCCCGGC CACGCCCGAG
GCCAGCGGCG TGAGCCTCAC CGGCCTTGAA TATCCGCTTC AGGATGCCAC CCTGACCTTC
GGCACAAGCT GGGGCATGAG CAACGTCTTT GTCGAAACCC AGGCCACCGT GACCCTGCGC
AGCGGGCGGC TGTTTGTGTT TCATCTTTTC AGGTCCTGA
 
Protein sequence
MHWVLLANGP LTLSPVIRQV ISTAERLIGV DGGSRHLRAM GMLPHLAVGD MDSISEELLQ 
EYRQADVELH LHPPKKDATD LELALELALT RGASRISILG GTGGRLDHTL GNIFLLSRCL
PAGIPACIMD QEQCVHLTDQ SLTLSGAVGD TLSLLPATPE ASGVSLTGLE YPLQDATLTF
GTSWGMSNVF VETQATVTLR SGRLFVFHLF RS