Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3421 |
Symbol | |
ID | 8379122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3860199 |
End bp | 3860837 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645002658 |
Product | thiamine pyrophosphokinase |
Protein accession | YP_003159909 |
Protein GI | 256831181 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1564] Thiamine pyrophosphokinase |
TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACTGGG TTCTTTTGGC CAACGGGCCC CTGACTCTCT CGCCGGTCAT CAGGCAGGTC ATTTCCACCG CCGAAAGGCT GATCGGGGTT GACGGCGGCA GCAGGCATTT ACGCGCCATG GGAATGCTTC CGCATCTGGC CGTGGGCGAC ATGGACTCCA TTTCCGAAGA ACTGCTTCAG GAATACCGAC AGGCGGACGT GGAATTGCAC CTGCATCCAC CCAAAAAAGA CGCCACGGAC CTGGAACTGG CGCTCGAACT GGCCCTCACG CGCGGCGCGT CCCGCATCTC CATTCTGGGA GGCACCGGGG GCAGGCTCGA CCACACCCTG GGCAACATCT TTCTCCTGTC ACGCTGCCTG CCCGCAGGAA TCCCGGCCTG CATCATGGAC CAGGAACAAT GCGTGCACCT CACGGATCAA TCCCTGACCT TGAGCGGCGC AGTGGGCGAT ACCCTGTCAC TGCTCCCGGC CACGCCCGAG GCCAGCGGCG TGAGCCTCAC CGGCCTTGAA TATCCGCTTC AGGATGCCAC CCTGACCTTC GGCACAAGCT GGGGCATGAG CAACGTCTTT GTCGAAACCC AGGCCACCGT GACCCTGCGC AGCGGGCGGC TGTTTGTGTT TCATCTTTTC AGGTCCTGA
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Protein sequence | MHWVLLANGP LTLSPVIRQV ISTAERLIGV DGGSRHLRAM GMLPHLAVGD MDSISEELLQ EYRQADVELH LHPPKKDATD LELALELALT RGASRISILG GTGGRLDHTL GNIFLLSRCL PAGIPACIMD QEQCVHLTDQ SLTLSGAVGD TLSLLPATPE ASGVSLTGLE YPLQDATLTF GTSWGMSNVF VETQATVTLR SGRLFVFHLF RS
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