| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3412 |
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| Symbol | |
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| ID | 8379113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3849655 |
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| End bp | 3852105 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645002649 |
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| Product | diguanylate cyclase with TPR repeats |
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| Protein accession | YP_003159900 |
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| Protein GI | 256831172 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.690369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGG CCACTTCCAT CGAGACCGGC ACGCTGCGAA GACAAGACAT CATCGAATAC
GAGCCCCTGC TCAAAACCGC CCTTAGGGCC ATCATTCCCT TTTCCTCCTA CAGCCTCATG
TTTCCGGCCA AAACACCTGA AAACATGGAA GCGGAGCCGC AGCATCCCTT CGGACGCGCG
ACCCTGGAAA ATGATCGACT CTCGCTGCCG CTGACGTATT CGGACCGGCT GCTCGCGATC
TTTGAAGCCA GAGGAGTGGA CCCTGAGGAA ACGGCCCGGG CCCTGCCCTT TCTGCCGCAG
ATGGCCTCGC TGTGTCTGGA GCAGATCACG ATTCGCAAAT CGGCCATCAC CGATCCGCTG
ACCGGCCTCT TCAACCGCCA CTGCATGCAT CAGGGCCTGA TCCGGGAAAT TTCCGGCATC
GTCGGCTCCA TCATGCCTGG TCCCGAAGCC ATGGCCGACG ACTCCCTGCA GGGGCACAGC
GCCTGCTTCG GCCTCATCAT TCTGGATCTG GACCGCTTCC GCCAGATCAA CGAAAATTTC
GGACACAATT TCGGGGACAA AATCCTGGTT CTGGCAGCGG AACGGCTGCG CGCCGTCTGC
CCCAAGCAGA CCCTGGTCTG CCGTCTGGAC GGAGATTCCT TCGGCGTGCT CTGGCCGCAG
GCCTCCCGCG CCAAGATGAG CGAACTGGCC CTCAGCCTCG GCGCCGAACT GGCCAAGGTC
ACGGCGCGCT TCACGCCCCT GCGCGAAGAC GTCGGCGTCT CGGCCAGTAT CGGCCACGTC
AACTATCCGC AGGATCTTCA AGGGGCGCAA TTTCAAAAGG CGCCCGAGGA GCAGGCCTGG
CTGATTCTGG AAAAAGCGGA AAAAGCCCTG AACACCGCCA AGGCCGGCGG CCGCTCCCAG
ATCTATTCCT TCCGACAGAT CCTGACCCAG GGCGGGATGG TGCTTGAAGT AATGCCCATG
AATCGCCTGA TCATCAACCT CGGCCGGAGC ATGGATGCCC ACGAAGGGCA ACGCTTTCTG
ATCTGGTCCC GCAAGTTCAA CGGCAGCGAA ACCATTGTCG GGAGACAGGG TGATGCGATT
TTTGGCCACT ACCCGCCCAT GTACAAGGCC GAGGTCTCGC TGGTCGAAGT GCAGGAGGAA
ATGTCCATCG CCGAAGTGCT GGTGCAAAGC GATCCGAACT GGACCGTGGA GAAAGGCGAC
AAGCTGACCC TGCTCGACGA CCACACAGGG CGCATGGAGC AGCGCGAAGT TCAGCCCGGC
GACCGCACCC CGCAAAAAGA CCCCCTCACC GGGCTCTATC CCTACCGGGA CTTTTTACAA
GCCTGGCAAG CGGCCCGCAT CCAGGCAAAA AATTTCTGCA TGGTGCTCAT GCGCCTTGAA
ACGCCCCATG CCGACCGCAC GCCCATGGAC AAGATGAAAG AAGAGCAGTT CTTTCAGACC
CTCGCCAGCC GGGTCGAAGC CCTGTTCGGA GCGGAGGCCC TTGGCGGACG GTTCAGCGTG
AACTGCATCA TCTACCACGT ACCGGGCCTG GATCAGGAAG AATGCCTGCG CATCGTGCGC
GAACTGCTTG AGGACGACCG CTTCGCCGAA CTGGAAAAAT CCGTAGGCAT CGCGGCCTAC
CCCTTCCTGG ACTACACGCG CTCCGACATC CTGGAAAATG CGCGCAAGGC CCTGGATCAC
GCCGACTTCC TGCACGATGA GCGAATTGCC TGCTTCGATT CCGTATCCCT GAACATCAGC
GCCGACCGCC TTTTTGCCCA AGGCGAAATC TATGATGCCA TCGCCGAATA CAAGAAAGCC
CTGACCGTCG ACGAAGGCAA CCTGCTGGCC CGCAACTCCC TGGGAGTCTG CTATGCGCGG
CTGAACAAGT ACGCCAAGGC CAGGACCATC TTTCAAGACC TGACCGGCCT CCATCCGGAA
CACATCATGC CGCTCTACAA CTTCGGTTGC GCCTGCCTCA AAGACGGGGA CCCCGTGGCC
GCCCGGCAGG CCTTCGAGCA GGTGCTCTCC ATCCGGCCCG ATCATGTCTA TGCGCTGATC
CGCCTGGGCC TCATGGCAGA GGAGGAGGGC GACTTCGAGC GGGCCTGGAA CCTCTACGAA
CAGGTCCGGG CCATGTCCGA CGGGGAGCAT CTCGCCGCCA CACACAATCT GGCCTACCGC
TACCTGGCCA GACTGGCTTT TCGCCGCGAC GACCGGGATA CGGCCCGGGA ATATCTGCAC
CAAGCCATCA CGGCCAACCC CCAGGACGCC CACTCCTTCC ATCTTCTGGC CACGATCTAC
CTGGAGCGCG GTGACGATCC GGAAATCGCC GAATCTCTGG CCCGGCAGAG CGTGCACTTG
AAAACCGACT CCCCCGCCTT CTGGGAAGTC CTGATCACGG CCCTGGAGCA ACAAGGCAAG
ATTGAAGAGG CAAACCAGAC AAAAATTCGC GCCGCAGCGC AAACTGGTTG A
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| Protein sequence | MNTATSIETG TLRRQDIIEY EPLLKTALRA IIPFSSYSLM FPAKTPENME AEPQHPFGRA
TLENDRLSLP LTYSDRLLAI FEARGVDPEE TARALPFLPQ MASLCLEQIT IRKSAITDPL
TGLFNRHCMH QGLIREISGI VGSIMPGPEA MADDSLQGHS ACFGLIILDL DRFRQINENF
GHNFGDKILV LAAERLRAVC PKQTLVCRLD GDSFGVLWPQ ASRAKMSELA LSLGAELAKV
TARFTPLRED VGVSASIGHV NYPQDLQGAQ FQKAPEEQAW LILEKAEKAL NTAKAGGRSQ
IYSFRQILTQ GGMVLEVMPM NRLIINLGRS MDAHEGQRFL IWSRKFNGSE TIVGRQGDAI
FGHYPPMYKA EVSLVEVQEE MSIAEVLVQS DPNWTVEKGD KLTLLDDHTG RMEQREVQPG
DRTPQKDPLT GLYPYRDFLQ AWQAARIQAK NFCMVLMRLE TPHADRTPMD KMKEEQFFQT
LASRVEALFG AEALGGRFSV NCIIYHVPGL DQEECLRIVR ELLEDDRFAE LEKSVGIAAY
PFLDYTRSDI LENARKALDH ADFLHDERIA CFDSVSLNIS ADRLFAQGEI YDAIAEYKKA
LTVDEGNLLA RNSLGVCYAR LNKYAKARTI FQDLTGLHPE HIMPLYNFGC ACLKDGDPVA
ARQAFEQVLS IRPDHVYALI RLGLMAEEEG DFERAWNLYE QVRAMSDGEH LAATHNLAYR
YLARLAFRRD DRDTAREYLH QAITANPQDA HSFHLLATIY LERGDDPEIA ESLARQSVHL
KTDSPAFWEV LITALEQQGK IEEANQTKIR AAAQTG
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