Gene Dbac_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3404 
Symbol 
ID8379103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3839694 
End bp3840698 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID645002639 
ProductABC transporter related 
Protein accessionYP_003159892 
Protein GI256831164 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.368682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTT TCGAGCTGCG CGATGTGCGC GTTGCCTATG ACGGCCGGGT GGTGCTCGAT 
CTGCCGCGGC TGAATATCGA AGAGGGCGAG GCCTATTCTC TGCAAGGACC CAACGGGGCC
GGAAAATCGA CCCTGCTCGG CATCCTTTCC TTTTTGAATG CTCCGCATCA GGGCCAGGTC
CGCTTCGAGG GCGGCCCCGT GTTCTGGAAA GAATCCGCGC TCCGAGCCCT GCGCCGCAAC
GTTGGGCTGG TGGAGCAGCA TCCGGTCATG TTCAGCCGCA GCGTGCGCGA GAATGTGGGC
TACGGGTTGA CCATCCGAGG AGTGGACAAG GCCCGGCGCG AACGCCTGGT CGACGAGGCC
CTTGATCTGG TGGGCCTTGC CCACCTGGCC GGCAGCTATG CTCCGCGCCT GTCGGGCGGA
GAAACTCAGC GCGTGGCCAT AGCCAGGTCT CTGGCCAGCC GTCCCAAGGT TCTGCTCCTG
GACGAGCCCA CGGCCAGTGT CGATACCCAG AACCGGGTCA TCATCGAGCA GATCGTGGCC
GATCTGCGCG ACCGAGGTGA TACCACCATC GTGCTCTGCA CCCACAACCG CTCCCAGGCT
GCGGCGCTGT GCCCCAAGGT CATTTATCTG GAAGACGGCC GTCTCGCCGC GCGTCCGCTG
AGCAACTCCT ACGCCGGGCA GTTCGTGGAC GACAACGGAC AGACCTGGTG CCGCATCGCT
GCGGGCTTTC GGGTGCCGGT ACCACAGTGC GGACCGGGCC GGGGCCGGGT GGTCATCGAA
CCGGGCGTGG TGCGCCTGAG TGTGGCGAGC GCACCCGGCT TGAATCGGGG AATATTGACC
CGGGTTCGGC TTGAGGGCGA TATGGTCAGC CTGAGCGTCG ATCTGGGAAG GCCGTTGCAT
GTGCAGATGG GATTGAAGGA GTTTTGGGGC GCAGGCCTTG AGATCGGGGC GCTGGTTCAG
GCGGAGATTC CGGCTGCGGC TGTGGAGTGT TTTACGGGGT CTTGA
 
Protein sequence
MSLFELRDVR VAYDGRVVLD LPRLNIEEGE AYSLQGPNGA GKSTLLGILS FLNAPHQGQV 
RFEGGPVFWK ESALRALRRN VGLVEQHPVM FSRSVRENVG YGLTIRGVDK ARRERLVDEA
LDLVGLAHLA GSYAPRLSGG ETQRVAIARS LASRPKVLLL DEPTASVDTQ NRVIIEQIVA
DLRDRGDTTI VLCTHNRSQA AALCPKVIYL EDGRLAARPL SNSYAGQFVD DNGQTWCRIA
AGFRVPVPQC GPGRGRVVIE PGVVRLSVAS APGLNRGILT RVRLEGDMVS LSVDLGRPLH
VQMGLKEFWG AGLEIGALVQ AEIPAAAVEC FTGS