Gene Dbac_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3396 
Symbol 
ID8379095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3832645 
End bp3833283 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID645002631 
ProductRadical SAM domain protein 
Protein accessionYP_003159884 
Protein GI256831156 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02495] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA CGATTCCTTC ATGGGAACGC GTGCGCGGCA TGGTGCCGGT GAGTCTTTGC 
GACTGGCCGG GCAAAATCAC GTGCGTGCTT TTTGCCGGCG GCTGCAATTT GCGCTGTCCG
ACCTGCCACA ACGCTTCCCT GGCCTGGAAA TGGGCATCGC TGCCGAATCT GAACCGGGAG
GTCGTTCTGG CCGATCTGCG TCGCCGCAAA CGCTGGCTGG ACGGGATCAC CCTGTCCGGA
GGAGAGCCGA CCTGCTTGAC GGACCTGGAT GATCTGCTTG CGGACCTGGC CTCGACCGGC
CTGCCGGTCA AGCTTGATTC CAACGGCTCC GCGCCGGGTG TCCTGGCACG TGTGCTTGAG
GCCGGACTTG TCCAGTCCGT GGCCGTGGAC GTCAAAGGAC CCTGGTCAAT GTATCCTGAA
CTGACCGGGC AGGCCATGGA CGCCGATGCG GCCTGTGACG CGCTGGGAGA TGTTTTCGAT
CTGGCCCAGG CGTATCCCGG CCGGGTCTAT TTTCGCTGCA CCAAGGTGCC GAGCCTGACT
CCCGAGGATC TGGAGACCAC CCAGGCCCAG ATGCCGCAAG GGCTGCCTTT GCATTTCCAG
GAATTTGTGC CTCCTCGAAG CTGTGACGAT TTTTCCTGA
 
Protein sequence
MTDTIPSWER VRGMVPVSLC DWPGKITCVL FAGGCNLRCP TCHNASLAWK WASLPNLNRE 
VVLADLRRRK RWLDGITLSG GEPTCLTDLD DLLADLASTG LPVKLDSNGS APGVLARVLE
AGLVQSVAVD VKGPWSMYPE LTGQAMDADA ACDALGDVFD LAQAYPGRVY FRCTKVPSLT
PEDLETTQAQ MPQGLPLHFQ EFVPPRSCDD FS