Gene Dbac_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3382 
Symbol 
ID8379079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp3816497 
End bp3817174 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID645002615 
ProductABC transporter related 
Protein accessionYP_003159870 
Protein GI256831142 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG TCTATCGCCT GCAAAACGTC GGCAAGGCCT ACGAACAGGG CGAGGAAACC 
ATCACCGTCC TTTCCGGCGT CGACCTGACC GTGCTCGGTG GAGATTCCCT GGCCATCGTC 
GGGGCTTCGG GATCGGGCAA GAGCACCCTG TTGCAGCTTA TGGGCACCCT GGACGTGCCT 
TCGAGCGGGT CCATCCTGTT CAACGGAGCC GACATATCAA CCCTCGGCTG GAAAGAACGG 
GCCCGCATTC GCAACAAGAA CATGGGCTTT GTTTTCCAGT TCCACCACCT GCTTCCAGAA 
TTCTCAACTC TGGAAAACGT GGCCATGCCG GGCATCATCG GCGGCGTGGC CAGATCGCTG 
GCCCTGGAAA AGGCCGACGC GGCTTTGTCG CGGGTGGGGC TTGCGCATCG ACGGCATCAC 
AGGGTAACCA CCCTGTCCGG GGGAGAGAGA CAACGGGCGG CCATTGCCCG GGCCATTCTG 
CTTGAGCCCG CCGTTGTGCT TGCCGACGAA CCTACCGGAA ATCTTGATGA ACGGACAGGT 
CGGGAAGTCA ACGATCTTTT ATTGCATCTG AACAAGGATC AGGGAGTCAC CCTGGTCGTC 
GTTACCCACA ATGCTGAACT TGCCCAATGC ATGCATCGCA CATTGGAGCT GCGTTCCGGA 
GAATTGTATG AAACGTAA
 
Protein sequence
MSEVYRLQNV GKAYEQGEET ITVLSGVDLT VLGGDSLAIV GASGSGKSTL LQLMGTLDVP 
SSGSILFNGA DISTLGWKER ARIRNKNMGF VFQFHHLLPE FSTLENVAMP GIIGGVARSL 
ALEKADAALS RVGLAHRRHH RVTTLSGGER QRAAIARAIL LEPAVVLADE PTGNLDERTG 
REVNDLLLHL NKDQGVTLVV VTHNAELAQC MHRTLELRSG ELYET