Gene Dbac_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3375 
Symbol 
ID8379072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3808608 
End bp3810056 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content59% 
IMG OID645002608 
Productthreonine synthase 
Protein accessionYP_003159863 
Protein GI256831135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAG CCAACGTTTT CCCCACATAC AGAGGGGAGA TGGAATATGT CTGCCTCGGC 
TGCCAGGCCA GATACCCCAT TGACGAACTG CATTACACCT GCCCCAGCTG CAAGGGTGTT
TTTCTGCTGG AGGATACCCG CTTTCCAGAG TTGGAAAAAA CACCCGGGTC CGCATGGCGC
GATATCTTCG ATTTGCGGGC GGCGACGAAA AATCCTGCCC TGCGCGGCAT CTTTCGTTTT
TACGAGCTGA TGGCCCCTGT CGTGGCCGAG GAGCACATTG TCTATCTGGG TGAGGGCAAC
ACCCCTGTGA CCCGCTCCTC GACCGCTCTG GAGCGCCTAG TGGGCCAATC CATGGCCTTC
AAGAATGACG GCCAGAATCC GTCCGCGTCA TTCAAGGATC GCGGCATGGC GTGCGCCTAT
TCGTACCTGC GCCATCTGGT TGCCAAGCAT GGGTGGGACA ATGTGCTGAC CATCTGCGCC
TCCACGGGCG ACACTTCGGC CGCGGCGGCA CTCTACGCCG CGTATGTTGG CGAGCCCCTG
ACCTCGGTCG TGCTGCTGCC CCAGGGCAAG GTCACTGCGC AGCAACTGTC CCAGCCTCTG
GGCAGTGGGG CGAAAGTGCT CGAAATTCCC GGTGTTTTCG ATGACTGCAT GAAGGTGGTC
GAATATCTGG CCGATCATTA CCGTGTGGCG CTCCTGAATT CCAAGAACGC CTGGCGCATA
CTCGGGCAGG AGAGCTATGC CTTTGAGGTG GCACAGTGGT ATGATTGGGA TCTGCGCGGT
AAGGTTATTT TCGTGCCCAT CGGCAATGCC GGAAACATCA CGGCCATCAT GAGCGGCTTC
CTGAAGCTGC TGCGGCTTGG GATCATCGAG ACCCTGCCGC GCATCATCGG CGTGCAGTCC
GAACACGCCG ACCCCGTTTT CAGGTACTAT GACCAGGACC CCGGCCATCG CCGGTTCGAG
GCCGTGAAGG TCCGGCCGTC AGTGGCCCAG GCCGCGATGA TCGGCAATCC CGTATCCTTT
CCGAGGGTCG CTTTTCTGGC GGAGCAGTAT CAGAAGCTGG GCGGCGCCGG ATCTTTCGCG
GTGGTGCAGG TCAGCGAACA GCGCATCATC GAGTCCATGC TGCTGGCCAA CAGGCACGGC
CATATTGCCT GCACCCAGGG CGGGGAATGC CTGGCCGGAC TGTTCAAGGC CAAAGAGCTT
GGGCTCATGG AAGAGGGCGA ACTTGCGGTG CTCGACGCCA CCGCCCACGC TTTGAAGTTC
GCTGGATTCC AGGACATGTA TTTCCATGAC GGGTTTGGTC CCGAATTTGA AATCACGCCG
GACAGGAAAC TGGCCAACGT GCCGCGTCTG GTCATTGATC AGCAGGACAA AGAGCGCCTG
TCCGAGGATG CGTTTACGGT TCAGGCCGCA CAAAATGTGG TCGGCATTCT GGGGCTGGAT
AAAAAATGA
 
Protein sequence
MREANVFPTY RGEMEYVCLG CQARYPIDEL HYTCPSCKGV FLLEDTRFPE LEKTPGSAWR 
DIFDLRAATK NPALRGIFRF YELMAPVVAE EHIVYLGEGN TPVTRSSTAL ERLVGQSMAF
KNDGQNPSAS FKDRGMACAY SYLRHLVAKH GWDNVLTICA STGDTSAAAA LYAAYVGEPL
TSVVLLPQGK VTAQQLSQPL GSGAKVLEIP GVFDDCMKVV EYLADHYRVA LLNSKNAWRI
LGQESYAFEV AQWYDWDLRG KVIFVPIGNA GNITAIMSGF LKLLRLGIIE TLPRIIGVQS
EHADPVFRYY DQDPGHRRFE AVKVRPSVAQ AAMIGNPVSF PRVAFLAEQY QKLGGAGSFA
VVQVSEQRII ESMLLANRHG HIACTQGGEC LAGLFKAKEL GLMEEGELAV LDATAHALKF
AGFQDMYFHD GFGPEFEITP DRKLANVPRL VIDQQDKERL SEDAFTVQAA QNVVGILGLD
KK