Gene Dbac_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3310 
Symbol 
ID8379006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3744369 
End bp3744992 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID645002543 
ProductRibonuclease H 
Protein accessionYP_003159798 
Protein GI256831070 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCAGCC CCAAAGGCTG CACTCAGTTT GCGGATGAGA TTCAGGCCGG CGTCGACGAA 
GCCGGACGCG GCTGTCTTGC CGGTCCGGTG GTGGCGGGGG CAGTCATATT GCCTCCGGAT 
TTCGACCTTC CGGGACTGAC CGATTCCAAA AAGCTCTCCT CGCGACGGCG CGTGGTGCTT 
GCACAAGCCA TCAAGGCCCA GGCAGTGTCC TGGGCCTTAG GTTTTTCCTG GCCCGGCGAA 
ATCGACCGCA TCAACATCCT GCAGGCCTCA CTGGCCGCCA TGGCCCGTGC CGTGGAAGCC 
CTGAGAGTCA GTCCGGGCCT GGTGCTGGTG GACGGCAACC AGCGTTTCCC CTCTTCTCTG 
CCCCAAAAGA CCGTGGTCGG CGGCGACGCC CTTCATCCCT GCATCTCCGC AGCCTCAATC 
CTGGCCAAGA CCTTTCGGGA CGATCTGTTG CTGTGCATGG ATCAGCGCTA TCCGGGTTAC 
GGGCTGGCCG TGCACAAGGG CTACGGCACC AAGGCGCATC TTGATGCCTT GCGCCGCCTG 
GGGCCAAGCC CCGCGCACCG GGTCAGTTTT CGCGGCGTCG GACCGACGCC GCGGGAGGCG 
CAGCTGTGGC TGCCCGGCAT CTGA
 
Protein sequence
MFSPKGCTQF ADEIQAGVDE AGRGCLAGPV VAGAVILPPD FDLPGLTDSK KLSSRRRVVL 
AQAIKAQAVS WALGFSWPGE IDRINILQAS LAAMARAVEA LRVSPGLVLV DGNQRFPSSL 
PQKTVVGGDA LHPCISAASI LAKTFRDDLL LCMDQRYPGY GLAVHKGYGT KAHLDALRRL 
GPSPAHRVSF RGVGPTPREA QLWLPGI