Gene Dbac_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3293 
Symbol 
ID8378989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3727718 
End bp3728896 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content52% 
IMG OID645002526 
Productglycosyl transferase group 1 
Protein accessionYP_003159781 
Protein GI256831053 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCTA AACGTGTATT GATCGTTCAT AATCGTTATA TTCACCGTGG CGGGGAGGAC 
TCAGTTGTGG AATCTGAAGC CGCTATGCTG GCGTCCAACG ACATTGCTGT TCGAATATAT
GAAGAATATA ATCATGGATT GAGCGAACAG TCGTTGTTGC GGATGGTTCT GGATGCGTTC
TGGTCTCGGC GTAGCGCCCA ACGTCTTGAA GCAGAGATTT CCTTGTTCAA GCCTGATGTT
GTTCACGTCC ACAATTTTTT TCCCCGTATC TCCCCGGCTG TTTTTTGGGT AGCCCGTCGT
TTGGGCGTTC CTACCATCAT GACGTTGCAT AATTTTCGGT ACGCATGCGC CCAAGGCATG
CTCTTGCGCG ATGGTCAAAT ATGCGAGTTG TGTTTGGGGC GAAGTGGGCA TTGGGGTGTG
TTTCACAGGT GCTACCGCGG CTCCTTCCTC CAGTCTCTGG TTCTGGTCGC CAGTTTTGGG
CTGCATAAAG TGTTGGGAAC GTTTAAGGCC AAAGTCTGTC GTTATATTGC CCTCAATGAA
TTTTGTCGCG CCAAATTTGT TGCTGCCGGG CTTCCTGCGG AGTTAATGGC GGTCAAGCCG
AATTTTGTAG ATTTGCCAAA ACCGGATCAG AGGCCACGTT GCGGAGGTCT GTTCGTCGGT
CGACTGTCTC CGGAAAAGGG ACTCGAAACG TTGCTGGCTG CTTTGGAGCA GCAACCCGGA
GTCAAATTCA CCATTGTTGG TGACGGTCCC ATGGCTGGTA GGGTGAGTCG GACGAAAACA
GTGGACACCC GAGGCTGGCT GTCTCCTCAT GACGTTCAGC AAGCCATGTG TGAGGCGGCT
TATTTGGTGG TCCCAAGTCT TTGGTACGAA ACATTTGGCC TAGTTGTTGT CGAGGCTTTT
GCCTGTGGTT TACCCGTCAT TGCCAGCAGG CACGGCGCGC TGGCCGAAAT TGTCGAAGAC
GGCGTGACAG GCCTTCTTTT CGAGCCAGGC AGCGCCAATG ACCTCGCGAG GGCCTTGTAT
TGGGCTGAAA CGCATCCTGA TGAGATGCGG GCTATGGGCC AGAACGCTCT TGAGGTGTAT
CAAGATCGCT ACTCACCGGA TGTCAATTAT AAAATGCTTA TGAACATCTA CCAGGAAGCA
ATCGATGCAT GCCGCCAATC AAACCCTCAA GCCTCTTGA
 
Protein sequence
MHPKRVLIVH NRYIHRGGED SVVESEAAML ASNDIAVRIY EEYNHGLSEQ SLLRMVLDAF 
WSRRSAQRLE AEISLFKPDV VHVHNFFPRI SPAVFWVARR LGVPTIMTLH NFRYACAQGM
LLRDGQICEL CLGRSGHWGV FHRCYRGSFL QSLVLVASFG LHKVLGTFKA KVCRYIALNE
FCRAKFVAAG LPAELMAVKP NFVDLPKPDQ RPRCGGLFVG RLSPEKGLET LLAALEQQPG
VKFTIVGDGP MAGRVSRTKT VDTRGWLSPH DVQQAMCEAA YLVVPSLWYE TFGLVVVEAF
ACGLPVIASR HGALAEIVED GVTGLLFEPG SANDLARALY WAETHPDEMR AMGQNALEVY
QDRYSPDVNY KMLMNIYQEA IDACRQSNPQ AS