| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3287 |
|---|
| Symbol | |
|---|
| ID | 8378983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3721655 |
|---|
| End bp | 3722587 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645002520 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003159775 |
|---|
| Protein GI | 256831047 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAC GCGTTTTTGT CACAGGGGCA GCTGGTTTCA TTGGTAGCAA TACTGTGCGT
ACACTGGCCG AATCGGGCTG GACTGTCGTG GGGATTGGCC TTGGCGGACA GGAAGAAGCA
AAGCACCTAC GTGAACTTGG CCTGCACGCT TGGTTTGAAA CGTCTGTTAC GCTCGATGCA
CTTTGGCGCG TAGAGAGCGA GGCCGGAAGC CCAGATGCGA TCATACATTG TGCCGGAAGC
GGCTCAGTCG CCTATTCCAT GACGCAGCCC AGGCAGGATT TTCTTGGAAA TGTGAATACA
ACGCTAGATA TTTTGGAGTT TGTTCGGCAA TCCTCTGGGC GCATTGCCGT GGTTGTGCCT
TCGAGTGCCG CTGTATACGG CGTTGTACAT CAACTTCCCA TATCAGAGGA CGCTCCTTTA
CACCCAATTT CTCCTTATGG AACGCACAAA ATTGTAATGG AAATGTTGTG CAAATCCTAC
GCGAAACAAT GGGGTATTCC TGTTTGCGTG GTTCGTCTTT TTTCCGTTTA TGGGGCAGGA
TTACGCAAGC AGCTTCTTTG GGACGCCTGT TGCAAGGCTA CGGCAGGAAC ATTCAGCTTT
TTTGGTACAG GTGCAGAAAT TCGCGATTGG CTGCACGTGC GAGATGCCGC ACGGCTTTTG
GCAGACGCCA TTAATTTTTC TTCTCCCGAT TGCCCTGTGC TCAATGGCGG CTCCGGACGA
GGGATTAGCA TTCGCGAAAT TCTGACAACT GTAGGTAATC TTTGGAACCC GAAGGTAACT
CCCACGTTTT CTGGCGAGGC CAGAAGTGGA GATCCGGCTC ATTATATCGC AGATGTGTCA
CGCCTCAATG CTCGAGGCTA CGTGCCTTCC GTGATTCTAG ATCAGGGACT TGCGGAATAT
GTTGAATGGT TCCGAGCAGA GGTGGGCGCA TGA
|
|---|
| Protein sequence | MTKRVFVTGA AGFIGSNTVR TLAESGWTVV GIGLGGQEEA KHLRELGLHA WFETSVTLDA
LWRVESEAGS PDAIIHCAGS GSVAYSMTQP RQDFLGNVNT TLDILEFVRQ SSGRIAVVVP
SSAAVYGVVH QLPISEDAPL HPISPYGTHK IVMEMLCKSY AKQWGIPVCV VRLFSVYGAG
LRKQLLWDAC CKATAGTFSF FGTGAEIRDW LHVRDAARLL ADAINFSSPD CPVLNGGSGR
GISIREILTT VGNLWNPKVT PTFSGEARSG DPAHYIADVS RLNARGYVPS VILDQGLAEY
VEWFRAEVGA
|
|---|
| |