Gene Dbac_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3270 
Symbol 
ID8378966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3704234 
End bp3705184 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content58% 
IMG OID645002505 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003159760 
Protein GI256831032 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAG AAAGCAAAAT CTACGTCGCC GGCCATCGTG GACTGGTGGG AAGCGCCATT 
TGCCGAAGAC TGGAAAAGGA CGGGTTTGGC AATATTCTGA AGCGGACAAG TTCAGAGCTT
GATTTGCGCA ATCAGCAGGC CGTCGAAGAT TTTTTTGCGG CAGAGAAGCC GGAGTACGTA
TTTCTGGCCG CGGCCAAGGT CGGAGGCATT CACGCCAACG ACACCTACCC GGCGGATTTC
ATCCGCGACA ATCTTCAGAT TCAGACCAAC GTGATCGACG CCGCCTACAG ACACGGGGCC
AGGAAGCTCC TTTTCCTGGG CTCGTCGTGC ATTTATCCGA AGCTGTGCCC GCAGCCGATC
AAGGAAGAGT ATTTGCTGAC CGGCCCCCTT GAAGCCACAA ATCGCCCCTA CGCCGTTGCC
AAGATCGCCG GTATTGAGAT GTGCTGGGCT TACAACCGCC AGTACGGCAC CAGATATCTG
GCCGTCATGC CCACCAACCT TTACGGCCCG GGCGATAACT ACGACCTGCA TGCCAGCCAC
GTCCTGCCCG CCCTGATCCG CAAGGCCCAT GAGGCCAAAG TGCGGGGGGA CAGGAGCTTC
ATGGTCTGGG GCACGGGCAC GCCGCGTCGC GAATTCCTCT ACAGCGACGA CCTGGCCGAC
GCCTGCGTGT TCCTGATGGC CGAGGCCGGG AAGACCGACG CGATGTTCGG CGACCACGAA
CCGCCCCTGA TCAATATCGG TTGTGGCGAG GATGTGACCA TTGCCGAGCT GGCGGGCATG
GTGGCAGAGG TTGTGGGTTT TGAGGGAGAG GTTGAGTTTG ATTCGAGCAA GCCGGATGGA
ACGCCGCAGA AACTTCTTGA TGTGTCGAGA ATGAGGGGCA TTGGTTGGCG ACCGAATGTC
GCATTGCCGG TGGGGATCGG GCTCGCGTAC AAGGATTTTC AGGAAATTTG A
 
Protein sequence
MERESKIYVA GHRGLVGSAI CRRLEKDGFG NILKRTSSEL DLRNQQAVED FFAAEKPEYV 
FLAAAKVGGI HANDTYPADF IRDNLQIQTN VIDAAYRHGA RKLLFLGSSC IYPKLCPQPI
KEEYLLTGPL EATNRPYAVA KIAGIEMCWA YNRQYGTRYL AVMPTNLYGP GDNYDLHASH
VLPALIRKAH EAKVRGDRSF MVWGTGTPRR EFLYSDDLAD ACVFLMAEAG KTDAMFGDHE
PPLINIGCGE DVTIAELAGM VAEVVGFEGE VEFDSSKPDG TPQKLLDVSR MRGIGWRPNV
ALPVGIGLAY KDFQEI