Gene Dbac_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3269 
Symbol 
ID8378965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3703064 
End bp3704215 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content54% 
IMG OID645002504 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_003159759 
Protein GI256831031 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA AAGCTTTAAT AACGGGAATT ACGGGTCAGG ATGGGGCGTA TCTGGCCGAA 
TTTCTGATCA AGAAGGGATA CGAAGTCCAT GGCGTGAAGC GCCGGTCTTC GTTGTTCAAT 
ACCGATCGCA TAGATCATCT CTACGAAGAC CCGCATGTGG ATAACCGCAA GCTGGTTCTT 
CATTACGGCG ACCTGACGGA TTCCACGAAT CTGATCCGGA TTATTCAGGA AGTTCAGCCT 
GATGAGATCT ACAATCTCGC CGCTCAGAGT CATGTACAAG TTTCTTTTGA CTCCCCTGAG 
TACACCGCCA ACACGGATGC CCTGGGGACG CTGCGCGTTC TGGAGGCCAT CAGGATTTTG 
GGCCTGGACA AGAAGACCCG GTTTTACCAG GCGTCCACGT CCGAGCTGTA CGGTCTGGTG 
CAGGAAATTC CGCAGACCGA AAAGACGCCT TTTTACCCCA GATCTCCGTA CGCCTGCGCA 
AAGCTGTATG CATACTGGAT CACGGTCAAT TATCGTGAAG CGTACGGCAT TTACGGCTGT 
AACGGCATTC TGTTCAACCA CGAATCCCCG ATGCGCGGAG AAACCTTCGT TACTCGCAAG 
ATCACGCGTG CTCTGGCCCG GATCGTACTC GGGTTGCAGG ACAAGGTGTT TCTTGGGAAT 
ATGAACGCCA AGCGCGACTG GGGACATGCC AAGGATTATG TGGAGATGCA GTGGCTGATG 
CTGCAGCAGG ATACGCCCCG GGATTATGTC ATTGCCACGG GGCGTCAGTT CTCGGTGCGG 
GATTTCGTGA CTATCGCGGC TGCGGAACTT GGAGTGCACC TTGAATGGCG GGGCGAAGGG 
GTGGACGAGA AGGCCGTGAT TTCAGCGGTG GATGAAGCCG TTCTGCGGTC CCATCATGTC 
GGGAGATGCC CTTTGGACAC TCTGCCTCGG GTTGGAAGCG TGATCGTCGA GGTCGACCCC 
CGCTACTTCC GCCCGACCGA AGTGGAAACC TTGCTGGGGG ATCCGTCGCA AGCCAAGCGT 
GAACTGGGCT GGGAGCCTAA GATTTCATTC GAAGAGATGG TCAAGGAAAT GGTTGTCGAA 
GACCTTTCCC TTGCTGCCAA GGATAAAGTC TGCCGAGACA ATGGGTTCAA GGTTTATGAC 
TACAATGAAT AG
 
Protein sequence
MMKKALITGI TGQDGAYLAE FLIKKGYEVH GVKRRSSLFN TDRIDHLYED PHVDNRKLVL 
HYGDLTDSTN LIRIIQEVQP DEIYNLAAQS HVQVSFDSPE YTANTDALGT LRVLEAIRIL 
GLDKKTRFYQ ASTSELYGLV QEIPQTEKTP FYPRSPYACA KLYAYWITVN YREAYGIYGC 
NGILFNHESP MRGETFVTRK ITRALARIVL GLQDKVFLGN MNAKRDWGHA KDYVEMQWLM 
LQQDTPRDYV IATGRQFSVR DFVTIAAAEL GVHLEWRGEG VDEKAVISAV DEAVLRSHHV 
GRCPLDTLPR VGSVIVEVDP RYFRPTEVET LLGDPSQAKR ELGWEPKISF EEMVKEMVVE 
DLSLAAKDKV CRDNGFKVYD YNE