| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3245 |
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| Symbol | |
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| ID | 8378941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3677090 |
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| End bp | 3677788 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645002481 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003159736 |
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| Protein GI | 256831008 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCATCT CGCCGGGTTT TGAACTGATC GCGCGCGAGC CCGGATTTGT TGTCGTGCAC
AAGGATCCGG GCCTCGATTT TCACGACTGC GACGGTCGCA TGGGGTTGTG CAGCCTGGTC
CGGGATCGGC TGCAAGCCAG GGTCTTTCCG GTCCATCGCC TGGACAAGGC CACCTCGGGG
CTGCTGCTTT TGGCCAGGAG CCGGGAGTGG GCCGCGGCGC TGGCCGGATT GTTCCGCGAG
CGGGCTGTGC AGAAATACTA CATCGCCCTG TCGGATCTCA CTCCAGGCAA GAAGCAGGGG
CTCGTTCAGG GCGACATGGT CCGTTCGCGG CGGGGCAGCT GGAAGCTGGC GCGGAGCATG
GAGCGTCCGG CCAGGACGCG TTTTCTGAGC TGGTCCGTGC GGCCGGGTAT GCGCCTTTTT
GTCCTGAAGC CCATGAGCGG CCGCACCCAT CAGCTGCGCG TGGCCATGAA GAGCCTGGGC
GCGCCCATCC TGGGCGACAG CCTTTATCAC CCCATTGTCC CGGATTGGCC CGATCGCATG
TATCTGCACG CCCACACCCT GCGGTTTTCC CTGGGCGGAC AAAATTTTGC CTACGCCTGT
CCGCCCAGAA GCGGAGACAT GTTTTTGGAA GACGCGACGC AGAGCATGCT GCAGGCTCTG
GGGCCACTGG AGGGCCTTGC CTGGCCTGCG CAGCCCTAA
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| Protein sequence | MIISPGFELI AREPGFVVVH KDPGLDFHDC DGRMGLCSLV RDRLQARVFP VHRLDKATSG
LLLLARSREW AAALAGLFRE RAVQKYYIAL SDLTPGKKQG LVQGDMVRSR RGSWKLARSM
ERPARTRFLS WSVRPGMRLF VLKPMSGRTH QLRVAMKSLG APILGDSLYH PIVPDWPDRM
YLHAHTLRFS LGGQNFAYAC PPRSGDMFLE DATQSMLQAL GPLEGLAWPA QP
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