Gene Dbac_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3237 
Symbol 
ID8378933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3666944 
End bp3668002 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content59% 
IMG OID645002473 
Productbasic membrane lipoprotein 
Protein accessionYP_003159728 
Protein GI256831000 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGAA AATGTTTGCC CTTGTTCCTG CTGGCCTTTT TGGCCTTGGG ATCAACCTGC 
TTCGCCGAAG ACATGAAAGT CGGTTTTGTC TATGTGTCCC CGGTGGGAGA CGCCGGATAT
TCCTATGCCC ATGACCAGGG CCGACTGGCT GTCGAAGCCA TGGACGGAGT GACCACCTCG
TTTGTCGAAT CCGTGGCCGA AGGGCAGGAT TCCGAACGCG TCATCATGAA CATGGCCCGC
AAGGGGTATG ACGTCATCTT CGCCACAAGT TACGGCTACA TGGACCCCAT GCTGAAAGTG
TCCAAGGATT TTCCCAAGGT CAAATTCCTG CACTGTTCCG GCTACAAAAA TGCTGAAAAC
ATGGCCAATT ATTTCGGCCG CATCTATCAG GCCCGCTACC TGACCGGCAT GGTCGCAGGC
GCCATGACCA AGTCCAACGT GCTGGGCTAC GTGGCGGCCT TCCCCATTCC CGAAGTCATC
CGCGGCATCA ACGCCTTCAC CCTTGGCGCC CAGGCCGTGA ATCCCGATGT GCAGGTCCGC
GTAGTCTGGA CCAAGACCTG GTACGACCCG GCAACCGAAA AAGAAGCCGG CAAATCCCTG
CTCGACGTCG GTTGCGACGT CATCGCCCAG CATCAGGATT CCCCCGGCCC GCAGGAAGCG
GCGCAGGAAC GCGGCGTCTA CTCCGTGGGT TACAACACCG ACATGAGCGC TTTTGCGCCC
AAGTCGCACC TGACCGCAGC CATCTGGAAC TGGGGCCCGT TCTATACGGA AATGGTCCAG
CAGATCAAAG ACGGCACCTG GAAGAGCGAC TTCTACTGGT ACGGACTGGA CAAGGGCATC
GTCGATATCG CGCCCTTCGG CGAGATGGTT CCGGCCGATG TGCAGAAGAC CGTGCTCGAC
AAGAAGGCGG AAATCGCCGC CGGCACCTAT CAGGTCTTCA CCGGCCCCAT CAAGGACCAG
TCCGGGGCCG AGAAAGTCGC GGCCGGCACG GTCATGGCCG ACGCGGATCT GCTCGGATTC
AACTGGTTCG TGCAGGGCGT TGTCGGCACC CTGGAATAA
 
Protein sequence
MMRKCLPLFL LAFLALGSTC FAEDMKVGFV YVSPVGDAGY SYAHDQGRLA VEAMDGVTTS 
FVESVAEGQD SERVIMNMAR KGYDVIFATS YGYMDPMLKV SKDFPKVKFL HCSGYKNAEN
MANYFGRIYQ ARYLTGMVAG AMTKSNVLGY VAAFPIPEVI RGINAFTLGA QAVNPDVQVR
VVWTKTWYDP ATEKEAGKSL LDVGCDVIAQ HQDSPGPQEA AQERGVYSVG YNTDMSAFAP
KSHLTAAIWN WGPFYTEMVQ QIKDGTWKSD FYWYGLDKGI VDIAPFGEMV PADVQKTVLD
KKAEIAAGTY QVFTGPIKDQ SGAEKVAAGT VMADADLLGF NWFVQGVVGT LE