| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3227 |
|---|
| Symbol | |
|---|
| ID | 8378923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3658829 |
|---|
| End bp | 3659551 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645002463 |
|---|
| Product | sugar fermentation stimulation protein |
|---|
| Protein accession | YP_003159718 |
|---|
| Protein GI | 256830990 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
|---|
| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCATC TCTTGAAATT TCCACCCCGA AGCCGTAACG CCACCTTTAT TGCCCGCGAA
AAACGTTTTC TGGTCCATGT GCTTCTGGAT GGCCAACGGG TCACGGTCCA CACCAACAAC
TCCGGTTCCA TGCTGGGCCT GCTGCGCCCC GGCATGGAGG TCTTCATCTC TCCGGCCGGT
TCCCCGAAGC GAAAGCTGCC CTATACCCTG GAGCTGGTCC GCCCTTGTGG CGATTGGATC
GGGGTCAATA CGTCAACTCC CAACCGTCTG CTCAAAAAAG CCTGGGAGGC GTCGGCCATC
CCGGAACTTA ACGGGTATTC GGAGTTCCTG CCCGAGGCGG TGCACGGGGA TTCGCGGCTT
GACGCCCGAC TGTCCGGGCC CGCCGGAGAG TTCTGGATCG AGGCCAAGAA CGTGACCATG
GTCGAGGACG GCGTGGCCTG TTTTCCGGAC GCGGTCACGA CGCGCGGGCA AAAACATCTG
CTCGAACTCA TGAATCTCGC GCAGCGTGGC GTGCGCGTCG GGGTCTTTTT GGCGGTGCAA
CGCCCTGATG GCGGGTGCTT CGGCCCGGCG GACTTCATAG ATCCGCGCTT TGCCGAGCTG
TTCTGGATGG CCGCGGACAG GGGCGTTGAG TTCCTGCCTC ATGTCGTGCA CGTCAGTCCC
GAGGGTATTG CCCTTGGCCC CCGGCTGCCG CTTGTTTTTC GAAATTCAAC CCAATCTGGA
TAA
|
|---|
| Protein sequence | MHHLLKFPPR SRNATFIARE KRFLVHVLLD GQRVTVHTNN SGSMLGLLRP GMEVFISPAG
SPKRKLPYTL ELVRPCGDWI GVNTSTPNRL LKKAWEASAI PELNGYSEFL PEAVHGDSRL
DARLSGPAGE FWIEAKNVTM VEDGVACFPD AVTTRGQKHL LELMNLAQRG VRVGVFLAVQ
RPDGGCFGPA DFIDPRFAEL FWMAADRGVE FLPHVVHVSP EGIALGPRLP LVFRNSTQSG
|
|---|
| |