Gene Dbac_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3226 
Symbol 
ID8378922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3657736 
End bp3658743 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID645002462 
Productsigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_003159717 
Protein GI256830989 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTG ATACGTGTGG AATAATTGGA AAGAGTTCCG CCTTGCAAGA GGTATTTCGG 
ATCCTCGCCA AAGTGGCCCC TTCGGACAGC ACCGTCCTGG TCACGGGGGA ATCCGGTACC
GGCAAGGAAC TCCTGGTCCG CGCCCTGCAT CGCAACAGCA CGCGGGTGGA CAAGCCTTTC
GTGCCCATCA ATTGCGGGGC CATCCCCCGC GAACTGCTTG AATCCGAGCT CTTCGGGCAC
GAAAAAGGCG CTTTCACGCA TGCCATCCGG ACCAAGATAG GCCGCTTCGA GATGGCCCAT
GGCGGCACGG TGTTCCTGGA TGAAATAGGG GAGATGGACC TGTCACTGCA GGTCAAAATC
CTGCGCGTGC TGCAGGAGCG GGAGTTTGAG CGAGTCGGAG GCGGCAAGAC CATCAAGACC
GACGTGCGCG TGGTCGCGGC GACCAACCGC GACCTGGAAG AGGAAGTCCG CAAGGGCTCC
TTCCGCGAAG ACCTCTTTTA CCGTCTGAAC GTCATCCCCA TCGCCCTGCC CCCACTGCGC
GACCGCGGCG AGGACGTGCT GGTCCTGGCG CGTCATTTCC TGAAGCATTT CTGCGCAAAC
CGCCGACAAT GCGTTCTTGA GATGGCCGAT GACGCACGAG ACATCCTGGC CCGCTATTCC
TGGCCCGGCA ACGTGCGCGA ACTGGAAAAC TTCATGGAAC GCATGTCCAT CCTTTGCGAT
GCCGATCGCA TCGGCATCTT CGACCTGCCC GATAAGATCC TGCGCGAAAC CGGAATCGAG
GTGCCCAAAA GGCCCGTGCC CGCAGTGGAC GCAGGCTTTC GCTGGCCGGA ACTCCAGGAC
TTGCGGGACC AGCAGCTTGG CCTCAAAGAA TTCCTGGATC AGGTCGAGGA GCGGCTTTTG
AGCGAAGCCC TGGGGGAAGT GGACGGGGTC AAGAACAAGG CCGCCGAAGT TTTGGGCATC
AAGCGGACCA CCCTCATAGA GAAACTCAAA AAAAAGAACA TGTTATAA
 
Protein sequence
MTFDTCGIIG KSSALQEVFR ILAKVAPSDS TVLVTGESGT GKELLVRALH RNSTRVDKPF 
VPINCGAIPR ELLESELFGH EKGAFTHAIR TKIGRFEMAH GGTVFLDEIG EMDLSLQVKI
LRVLQEREFE RVGGGKTIKT DVRVVAATNR DLEEEVRKGS FREDLFYRLN VIPIALPPLR
DRGEDVLVLA RHFLKHFCAN RRQCVLEMAD DARDILARYS WPGNVRELEN FMERMSILCD
ADRIGIFDLP DKILRETGIE VPKRPVPAVD AGFRWPELQD LRDQQLGLKE FLDQVEERLL
SEALGEVDGV KNKAAEVLGI KRTTLIEKLK KKNML