Gene Dbac_3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3185 
Symbol 
ID8378881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3606799 
End bp3608481 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content62% 
IMG OID645002421 
ProductFormate--tetrahydrofolate ligase 
Protein accessionYP_003159676 
Protein GI256830948 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2759] Formyltetrahydrofolate synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGG CCGTGCAGTC CGACATCGCC ATCGCCCAGA AAGCCACGAT GCATCACATC 
CGCGACATCG CGGCAATGCT CGGCCTCGGG GACGACCAGC TTGAACCCTA TGGCAAGTAC
AAGGCCAAGC TCCCGCTTTC CCTGGCCGAA AAAGATCAGT GCAAATACGG CAAGCTCATC
CTGGTTTCGG CCATCACTCC GACCCCGGCA GGCGAAGGCA AGACCACCGT GTCCATTGGC
CTCAATGACG GACTGAACCG CATCGGCAAA AAGTCCATGG TCGTGCTGCG CGAGCCGTCG
CTCGGCCCGG TCTTCGGCAT CAAGGGCGGC GCCACCGGCG GCGGCTATTC GCAACTCCTG
CCCATGGAGG ACATCAACCT CCACTTCACC GGCGACTTCG CGGCCATCGA AAAAGCAAAC
AATCTGCTGG CCGCCCTCAT CGACAACAAC CTGCAGAGCA AGAGCCGCTC ACTCAACCTC
GACGGCAGGA CCGTGGCCTG GAAGCGCGTC ATGGACATGA ACGACCGTTC GCTCAGGCGC
CTGGTCTGCG GCCTTGGCGG TCTGGCGCAC GGCGTGCCCC GGGAGACGGG CTTCGACATC
ACGGCGGCGT CCGAGATCAT GGCCATTCTC TGTCTGGCTG ACGACCTGCC GGACTTGAAG
CGCCGTCTGG GGGATATCTT TCTTGGATTC ACCTTTAGCC GCGAACCCAT CCACGCCCGG
GACCTGAACG CCCAGGGGGC CATGGCCGCG CTGCTCAAGG AAGCCGTCAA ACCCAACCTG
ATCCAGTCCC TGGAAGGCAA CCCGGCGATC ATGCACGGCG GCCCCTTCGC CAACATCGCC
CAAGGCACCA ACACGGTCAT CGCCACCCGC ACGGGGCTTT GCCTGGCCGA TTATGTGGTC
ACAGAAGCGG GTTTCGGCTT TGACCTCGGC GGGGAGAAAT TTCTGGACAT CAAATGCCAA
TCCGCCGGAT TCGATCCCTG CGCGGTGGTC CTGGTGGCCA CGGTGCGGGC GCTCAAATAC
CATGGCGGCG TCGAACTTGC GCATCTGGCA GTGCCCAATA CCAAGGCCCT CAGCCGAGGG
CTGGAGAATC TCACCAAACA GATCGAGAAC GTGCGACTCT TCCATCTAAC CCCCATCGTG
GCCATCAACC GTTTCGCCAC GGACACGGAC GAAGAGCATC AGGTCATCCT CGACCACTGT
CAGTTCATGG GAGTGCAGGC GGCGGTCATG GAAGCGTGGG AAAAAGGAGG AGAAGGGGCC
GAGGAGCTGG CCGAACTGGT CGCGGCCACG GCCGACCAGT GCACCGCGCA TTACAAACCT
CTGTACGACT GGAACCAGAG CGTGCGCGAA AAAATCGAGA TCATCGCCAC CCGCGTCTAT
GGAGCCGCCT CGGTGGAATA TGCTCCCGGA GCGCTGAAAG ATCTGGAAAA GATCAAGCAG
CTGGGCCTTG AGGGATTACC CGTGTGCATC GCCAAGACGC AAAGCTCCCT CTCGGATCAG
CCGGGGTTGC GCGGCCGCCC GCGCGACTTC GTAGCCACCG TGCGCGAGGT CGAAATCGCC
TCTGGAGCGG GATTCCTGGT GCCCATCACC GGCAACATGA TGCGCATGCC CGGCCTGCCG
GAAGTTCCCT CGGCGGAAAA GATCGACATC GACGAAAAGG GCGTGATCAG CGGGCTGTTC
TAA
 
Protein sequence
MPKAVQSDIA IAQKATMHHI RDIAAMLGLG DDQLEPYGKY KAKLPLSLAE KDQCKYGKLI 
LVSAITPTPA GEGKTTVSIG LNDGLNRIGK KSMVVLREPS LGPVFGIKGG ATGGGYSQLL
PMEDINLHFT GDFAAIEKAN NLLAALIDNN LQSKSRSLNL DGRTVAWKRV MDMNDRSLRR
LVCGLGGLAH GVPRETGFDI TAASEIMAIL CLADDLPDLK RRLGDIFLGF TFSREPIHAR
DLNAQGAMAA LLKEAVKPNL IQSLEGNPAI MHGGPFANIA QGTNTVIATR TGLCLADYVV
TEAGFGFDLG GEKFLDIKCQ SAGFDPCAVV LVATVRALKY HGGVELAHLA VPNTKALSRG
LENLTKQIEN VRLFHLTPIV AINRFATDTD EEHQVILDHC QFMGVQAAVM EAWEKGGEGA
EELAELVAAT ADQCTAHYKP LYDWNQSVRE KIEIIATRVY GAASVEYAPG ALKDLEKIKQ
LGLEGLPVCI AKTQSSLSDQ PGLRGRPRDF VATVREVEIA SGAGFLVPIT GNMMRMPGLP
EVPSAEKIDI DEKGVISGLF