Gene Dbac_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3171 
Symbol 
ID8378867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3588459 
End bp3589796 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content62% 
IMG OID645002407 
Productpeptidase M48 Ste24p 
Protein accessionYP_003159662 
Protein GI256830934 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTA TTTTTGACGA TCGTGCCTAC CGGGGCACTC TGACCCGCCG GGACTTCATC 
AAGCTTTCCG CCCTGGCCGC CGTGTCCACG GCCGTGGCCG GGTGCGCTGC CAATCCCGTG
ACCGGGCATA GCCAGCTCAT GCTCATGGGC GAGGGTGAGG AAATCCAGGC CGACAGGGCC
AGTTCGCCGC ACCAGTTTTC CGCCGACTAC GGCCTAAGCC AGGACACGGC CCTGAATGCC
TATGTCAGCG GCGTGGGCGC TCGTTTGGCC CGGGTCACGC ACCGCGCGCA CATGCCGTAC
AAATTCAATG TGGTGAACGC GACATATGTG AACGCCTACG CCTTTCCAGG GGGAAGCATC
GCCGTCACGC GCGGCATTCT GGCCGAACTG GACAACGAAG CCGAACTGGC CGGACTGATC
GGCCATGAAC TCGGGCATAT CAATGCCCGG CACACGGCGG CGCGCATGTC CAAGAGCAAG
ATTCTGGGCG CGCTGGTCGG AGGTGCTTCG CTTATCGCCG GTACGGCCAG CCAGAGCCTG
GGCAATCTGG CGGGGACCGT GGGCGGACTG GGGGCCAGCC TGTTTCTGGC CAAATACAGC
CGCGAGGACG AGCGGCAGGC GGACGAACTG GGCATGGAAT ACATGGTCGG CGCCGGCTAC
ACGCCTCAGG GCATGGTCGG ACTCATGGAT GTGCTGCGTT CCATGAGCAA GCGTCAGCCC
AGCGCCATCG AGGCCATGTT CTCCTCGCAC CCCATGAGCA CCGAACGTTA CGAAATGGCC
GTGGCCCGAT CGCGTACCCG TTTCGGCGGT AGCGGGAATC TGCCGGACTA CCGGGAGCGC
TACATGGACT CCACGGCGAG GCTGCGCAAG CTTGGTCCCA TGTTCAAGCT GTTTCAGGAA
GGGGACAAGG CCATGGCCGC CAGGGAATAC GCCGTTGCCC AGAGCCGCTA CGCCGAGGGC
CTGAAGCTGT CTCCCAATGA TTATGCCGGG CTGGTCATGA TGTCCAAGTG CATGATCGCC
CAGAAGAACG GCAAGGGAGC CGCAGACTAT GCGGCCAGGG CCAAGCGGGT CTATCCCACC
GAGGCCCAGG CCCAGCACAT GCACGGCGTG GCCTCCATCC TCAACAAGGA TTATGCTGCG
GCGCTGGCCG ATTTTTCGGC TTACGAGCGG ATCCTGCCCG GCAATCCCTC GACGGTTTTC
ATGAAGGGCT TTTCCTACGA GGGCATGAAG AACAAGCAGA ATGCGGCTCA GGAATACCAT
CGCTACCTGA AAGTCGTGAC CCAGGGCGAA ATGGCCCAGC ACGCCTATTC CAGGCTAAAA
ACCTGGGGAT ACCTCTAA
 
Protein sequence
MSSIFDDRAY RGTLTRRDFI KLSALAAVST AVAGCAANPV TGHSQLMLMG EGEEIQADRA 
SSPHQFSADY GLSQDTALNA YVSGVGARLA RVTHRAHMPY KFNVVNATYV NAYAFPGGSI
AVTRGILAEL DNEAELAGLI GHELGHINAR HTAARMSKSK ILGALVGGAS LIAGTASQSL
GNLAGTVGGL GASLFLAKYS REDERQADEL GMEYMVGAGY TPQGMVGLMD VLRSMSKRQP
SAIEAMFSSH PMSTERYEMA VARSRTRFGG SGNLPDYRER YMDSTARLRK LGPMFKLFQE
GDKAMAAREY AVAQSRYAEG LKLSPNDYAG LVMMSKCMIA QKNGKGAADY AARAKRVYPT
EAQAQHMHGV ASILNKDYAA ALADFSAYER ILPGNPSTVF MKGFSYEGMK NKQNAAQEYH
RYLKVVTQGE MAQHAYSRLK TWGYL