Gene Dbac_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3169 
Symbol 
ID8378865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3586239 
End bp3586841 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content56% 
IMG OID645002405 
Productsignal peptidase I 
Protein accessionYP_003159660 
Protein GI256830932 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.559115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTC GTTGGCAGAC AATGCTCAAA GAATACGCCG AAGCCCTTAT CGTGGCGCTG 
ATTCTGGCGT TTTTTATTCG TTCCTTTGTG GTCCAGGCAT TCAAGATCCC ATCCGGATCC
ATGCTCCAGA CGTTGCAGAT CGGCGACCAT CTGCTGGTCA CCAAGTTCGC CTACGGCGTG
AAAATCCCGT TCACCAACAC CATGATCATC GAACGTGAAG GCCCGGAGCA GGGCGACATC
ATCGTTTTCG AATTCCCCGA AGATCCGTCC AAAGACTTCA TCAAGCGCGT TATCGGCGTT
CCCGGAGACG TCATCGAGAT CCGGGACAAG AAGGTTTTCC GCAACGGCGT GGAGCTGCAG
GAATCCTACA TTCAGCATGT GGACTCCTCC ACGTCCGTGC CGCGGCGCGA CAATTTCGGG
CCGGTGATGG TGCCCGAGAA CAAGTACTTC GTCATGGGCG ATAACCGCGA TGAATCCTAC
GATTCGCGTT TCTGGGGTTT CGTGGAACGC AACACCATCG AAGGCAAGGC CCTCATCCTG
TACTGGTCCT GGGCCAGCCT GACCGACATC CGTTGGGAAC GCATCGGGCA GCTGGTGGAG
TAG
 
Protein sequence
MNPRWQTMLK EYAEALIVAL ILAFFIRSFV VQAFKIPSGS MLQTLQIGDH LLVTKFAYGV 
KIPFTNTMII EREGPEQGDI IVFEFPEDPS KDFIKRVIGV PGDVIEIRDK KVFRNGVELQ
ESYIQHVDSS TSVPRRDNFG PVMVPENKYF VMGDNRDESY DSRFWGFVER NTIEGKALIL
YWSWASLTDI RWERIGQLVE