| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3141 |
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| Symbol | |
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| ID | 8378836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3555261 |
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| End bp | 3556889 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645002376 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003159632 |
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| Protein GI | 256830904 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.673343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCC GCGCCAAAGT GTTCACCATC ATCTTCGTCC TCTTCGCATC CCTCGGCGTG
GCGGATTTTT TCGTGCAGCG TTTTGTCGTT TACCCGAGCT TTCTTGAACT TGAAAATCAT
GAGGCGGGAC AAAACCTGCA ACGCATTTTC CACGCCATCG ACCGGGAAAA CTATCACCTG
GAGCGCATCT GCCGCGACTG GGCGACCTGG GATGATACCT ACGACTTCAT GACCACCCGC
TCCGAGGTCT ACAAGACGAG CAATCTCTAC GATGAAGCCT TGGACAGCAT TTCGGTGAAC
GTCATGATCT ATTGCGCAGA GGACGGAACG ATCGTCTGGA GCAACGCCCG TGATACGGCT
CAACAAAGCA GCCTGGCCCT TGAACTGCTG CAAAAGGGGC GCATCGCCCC GGACCACCCG
CTGTTGACCA TGACGGCCGA GGAAGATGGC GTCAACGGAG TCATCAATAC CGAACGCGGC
CCCCTGCTTT TCGCCACCAG GCGGATTCTG CGTTCGGACG GAAGCGGTCC GTCCAACGGT
TTTCTGATCG TTGGACGGTT TGTGAACCCG GCCATGGTCG AAACCCTCTC CGCACAGACA
CGCATCCCCT TCGAGATCGT CTACCCATAC GTCGAGGAGC GCATGGCCTG CGGCACATCC
GGGGTCACGA CCGCACACAT CGACAACCTC GACTACTTCA CCCGAAAAGA GGGAAAGTTT
GTCAGGGTCT GCAGCGCGTA CAATGACCCT GCGGGAAGGC CCATTTTCAG CATCCAATAT
CTCTTCCCCC GGGAGATCAC GCAAAAAGGC ATCGCCAGCA TCCGCTACGC CATGATCCTG
GTGATCTCGT CCGGGCTGAT CGTGCTGGTC ATATTGAACG TTCTGCTACA GGCCGTAGTC
CTGCGGCCCC TGCAAAAATT GACCAATCAC GCCTCCAGGC TGCGTCAGGA GGAAGACTAT
GCGCAGCGCC TCGACCTGCG CCGGGGTGAC GAGGTAGGGG TGCTGGCCGA CAGCTTGGAC
AACATGGTGC AGACCATCCG TGAGCGCACC GAGGACTTGA AGCGGGCCAA CGAGCAGTTG
ACGCTTCTGT CCATGCGGGA CGGCCTGACG GGGATCCCCA ACCGCCGCAT GTTTGATGAC
TCCCTGAAGC AGGAATGGCG CCGGGCCATG CGGGACAAAA CGCCCGTCTC GATCATCCTG
GGAGATGTTG ACTTTTTCAA GGATTACAAT GACGCCCACG GGCATCTGCA GGGGGATCAG
TGCCTCATCG CCGTGGCTGC GGTGCTGCAA CAGCAGATGA ACCGCCCAGC GGACCTGGTG
GCACGTTTCG GAGGCGAGGA ATTCGCCATC ATCCTGGCCG ACACCGGCAC CGATGGGGCC
GAACATGTGG CGCAGTCGCT ACGTCAGGCA ATCTTGGACC TGCACCTGGA ACACGGCCAC
TCCGATGCCG CGCCCTGCCT GACCATGAGT TTTGGCGTGG CCTCCATGGT TCCGCAGCCG
GAAGACGGGG ACGAGGGCAT GGCCGAACTG CTGCACAGGG CGGACCGCGC CATGTACCAA
TCCAAACGAT TGGGCCGTAA CCGGGTCATA GTCTGGAGCG ATGAGCAACC GGAATCTCCC
TCCCTGTGA
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| Protein sequence | MSIRAKVFTI IFVLFASLGV ADFFVQRFVV YPSFLELENH EAGQNLQRIF HAIDRENYHL
ERICRDWATW DDTYDFMTTR SEVYKTSNLY DEALDSISVN VMIYCAEDGT IVWSNARDTA
QQSSLALELL QKGRIAPDHP LLTMTAEEDG VNGVINTERG PLLFATRRIL RSDGSGPSNG
FLIVGRFVNP AMVETLSAQT RIPFEIVYPY VEERMACGTS GVTTAHIDNL DYFTRKEGKF
VRVCSAYNDP AGRPIFSIQY LFPREITQKG IASIRYAMIL VISSGLIVLV ILNVLLQAVV
LRPLQKLTNH ASRLRQEEDY AQRLDLRRGD EVGVLADSLD NMVQTIRERT EDLKRANEQL
TLLSMRDGLT GIPNRRMFDD SLKQEWRRAM RDKTPVSIIL GDVDFFKDYN DAHGHLQGDQ
CLIAVAAVLQ QQMNRPADLV ARFGGEEFAI ILADTGTDGA EHVAQSLRQA ILDLHLEHGH
SDAAPCLTMS FGVASMVPQP EDGDEGMAEL LHRADRAMYQ SKRLGRNRVI VWSDEQPESP
SL
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