Gene Dbac_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3126 
Symbol 
ID8378821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3541799 
End bp3542971 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content64% 
IMG OID645002361 
Productaminotransferase class V 
Protein accessionYP_003159617 
Protein GI256830889 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATA AATTACGATT GCTGACCCCC GGTCCCACTC CCCTACCGGA GGAGGTTCGC 
CTGGCCCTGG CCAAGGACAT GATTCACCAC CGCAAGCGCG ATTTCGTGCA GATCATGGAG
CGCATTCAGC CTGGCCTCAA GTACCTGTTC GGCACCGCGC AACAGGTTCT GCCCCTGTCC
TGTTCGGGCA CGGGAGCCAT GCACGCGGCC GTGACCAATC TTTTCGCGCC CGGCGAGAAA
GTGCTCGTGG TCGAGGGCGG CAAGTTCGGA GAGCGCTGGC GGGAGATCGC CCAGGCGCGT
GGTCTTGTCG TCACCTCCCT GGTTCTTGAA AACGGCCAGG CCGTGGCGGC CGAGGAGGTG
CGGGCGGCTC TGACGGCGGA TCCTGCGCTT TGCGGCGTGC TGGTCCAGGC CTCGGAGACG
TCCACCGGGG TGCTGCACCC CGTGCACGAG CTCGGCCAGG TGACCCGTGA CAAGGACGTG
CTCCTTGTTG TCGACGGCAT CTCGGCTGTC GGAATTTCGC CATGCCCCAT GGACGCCTGG
GACATCGACT GCCTGCTGAC AGGGTCCCAG AAGGGCCTCA TGCTCCCGCC GGGTCTGGCC
CTTTTGGCCT TGAGCGCCCG CGCTTGGGAC AAAGTGCGCA GCGTGGGTCC TACTGACTTC
TATTTCAACC TGCTGGCCGA GCGGGACAAG AGCCTGGGTC ACCAGACCCT TTTCACTTCC
CCGGTCAATC TGCTGCAGGG GCTGGCCGTG AGTCTTGATC TGTTCAAGGA ACAGACCCTG
GAGGCCGTGT ACGCCAAGCA GTGGGCGCTG ACGTCCATGG CCCGGGCCGG GGCGACAAGC
ATGGGGCTTG AGCTTTTGGC CACGACGCAT TTCACCTGGG GACTGACCGC CATCAAGCTG
CCGACAGGCA TCGATGGCGG CGAAGTGCTC AAAGTAGCGG CAGAGCGCTG CGGCGTGGTC
ATGGCCGGGG GGCAGGGCGA ACTGAAGAAG AGCCTGGTCA GGCTCGGCCA TATGGGCCAT
GTGGATTGGA GCGATGTCCT GGCGGGGCTT TACGCTCTGC GTGAAGGCCT GCATGCGGCC
GGTGGATATT GCGCCGCAAG GACGTATCTG GAAGACGCAG CCAGTGCCTA TGCAGAAGCG
CTGCGCGACG GTTGCCCCGA ATATCGGGCG TAA
 
Protein sequence
MLNKLRLLTP GPTPLPEEVR LALAKDMIHH RKRDFVQIME RIQPGLKYLF GTAQQVLPLS 
CSGTGAMHAA VTNLFAPGEK VLVVEGGKFG ERWREIAQAR GLVVTSLVLE NGQAVAAEEV
RAALTADPAL CGVLVQASET STGVLHPVHE LGQVTRDKDV LLVVDGISAV GISPCPMDAW
DIDCLLTGSQ KGLMLPPGLA LLALSARAWD KVRSVGPTDF YFNLLAERDK SLGHQTLFTS
PVNLLQGLAV SLDLFKEQTL EAVYAKQWAL TSMARAGATS MGLELLATTH FTWGLTAIKL
PTGIDGGEVL KVAAERCGVV MAGGQGELKK SLVRLGHMGH VDWSDVLAGL YALREGLHAA
GGYCAARTYL EDAASAYAEA LRDGCPEYRA