| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3121 |
|---|
| Symbol | |
|---|
| ID | 8378816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3533817 |
|---|
| End bp | 3536918 |
|---|
| Gene Length | 3102 bp |
|---|
| Protein Length | 1033 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645002356 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003159612 |
|---|
| Protein GI | 256830884 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1379] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATACTT TCATCGCCGA TCTGCACATC CATTCCAAAT TTTCCCGGGC CACGAGCAAG
AACCTCACGC CTAGAAACCT GCTGGCCTGG GCCGGGATCA AGGGTATCGA CGTTTTGGCC
ACGGGCGACT TCACCCATCC GGGCTGGATG GACATCATCA CCCGGCAGCT TGAAGCCGGG
GAAAATGGAC TGCTGCGACT GCGCGACGAC AAGGCGCTGG AACAGGAGCT GCCCTGGTAC
TCCGGGAACA TGAACGCGGC GCGTATCCGT TTTATGCTCT GCACCGAGAT CAGCTCCATT
TACAAAAAGC GGGGCAAGGT CCGCAAAATC CATAATCTGG TCTTCATGCC CAGCATCGAC
GCGGCCCTCA AATTCAACAC CCGCCTGGCG CAGGTCGGGA ACCTCGCCTC CGACGGCCGT
CCCATTCTGG GACTCGACGC GCACGATCTT CTTGAAATGG TTCTTGAAAC CGACCCGCTG
GCCTATCTCG TCCCCGCCCA TATCTGGACT CCCTGGTTTT CCCTGTTCGG GTCGAAATCC
GGCTTCGATC GTATCGAAGA CTGCTTTGAG GACTTAAGCG GAGAAATTTT CGCTCTGGAA
ACCGGCCTCT CCTCCGACCC GGAGATGAAC TGGATGCTCA GCGCCCTGGA CCGTTTTACC
CTAGTCTCGA ATTCCGATGC CCATTCCGGG GAAAAGCTGG GCCGGGAAGT CACTGTTTTT
TCCGGAGAGA GGTCTTTTGC GGGTATTCGC GCCGCCTTGC GGCGCGAGAG CGAAACGACG
CGTTTTGAAG GCACTCTCGA ATTCTATCCC GAGGAAGGCA AATATCACCT CGACGGTCAT
CGCAAATGCG GCGTCATGCT CGAACCCCAG GAGACAGCAG CGCACCGCGG GTTTTGCCCG
GTCTGCGGCA AACCTCTGAC CATTGGCGTG CTGAACCGCA TCTTTGCCCT CTCGGACCGG
GACTTGCCCG TACGCCCGGC CAATCATCCG GGATTCTCGT CGTTGGTGCC CCTGACCGAA
ATCCTTTCGG AGATTCTGGG GGTGGGTCCC GGCACGAAGA AAGTGCTTGG CATGTACAAC
CAGCTTGTTC AGGATTTTGG TTCTGAATTC AGTATATTGC GGGATGTTCC CGAAGAGGAC
TTGCGGCGCT CCTCCACGGT TTTGGCCGAG GCCGTGCGCA GGATGCGGCA GGGCGTGGTT
CACAGGCATT CGGGGTATGA CGGCGAGTAT GGGCGCATCT CCATGTTCGC GCCTCAGGAG
CTGCTCGAAT TCAAGCATGG GCGCATGCTG TCCATGGCTG CCCGTTCCGC GCCGCCGGAA
GTATTGGGAC AGCGCTGGCG CAAGACCAAG GGGGAGCTCT CGCTCCTGGC AGACGAAGCG
GTCCAGACGG CCAATGAAAT GCAAATGGCC GCGATTCTCG CCGGCCCCGG GCCGGTGCTG
GTCCTGGCCG GTCCCGGCAC GGGCAAGACC CAGACCCTCA TGGGCCGCGT GCGCCACCTG
CTTGCGCAGG GCGCCGACCC GGCGCGAATC CTGATTCTGA CTTTCACCCG CAAGGCCGCG
CGGGAATTGA AAGATCGCCT GCAGCGGCTT TGTCCGGGCC TGCCCGTGCT GCCCAAGACG
GACACCCTGC ACGCGCTGGG GCTTGAATAC TGGACCTCTG TCATGGGCGA GGCCCCGATC
CTTCTGTCCG AGGAGAGCAG CCGCAGACTT TTCGCGGCCG CCAATCCCGA CCTGCAGGGC
AAGGAACTCA AAACCGCCTG GAATGAACAA TCCCTGGCCC GCGAGGACGG GGTGCGCATC
CCCGGCGAAC ACACCAGATG CTATCTGGAC GACAAGGTCC GCTTCAATCT GGTCGATTAC
ACCGATCTGC TCGAATTCTG GCTCGAACAC CTCGAACTTG GGCAATGCGT TCCGGACTTC
GATCACGTCC TGGTCGACGA GGTGCAGGAC CTCTCCGCTC TTCAGCTCGG ACTGGTCACG
GCGCTTTGTG CCCAGGGAGG GCGGGGTTTT TTTGCCATCG GGGACCCGAA CCAGGCCATT
TACGGATTTC GTGGCGCGGT GCGTGATGTC GAGGGCAGAC TTCGTGCTCT GTGGCCGGAT
CTCAAAAGGA TCAGGCTGGT CCACAACTAT CGCTCGGCGC AGCAGATCCT AAGCCTTGCG
GCGCATCTTT TTACGGAAAA GCAGACCCTG GTGGCCCAGA AATCCGTCTT GGCGTCCCTC
GTGCTGTTCG AAGCCCAGAG CGCCGAGCAG GAGGCGGGCT GGATCGCGGG GCGGGTGCGC
GAACTCCTGG GAGGCACCGG CCACTGGCAG GCGGACACGC ACGAGGGGAA AAACATTTCT
CCCGGCGACA TCGCCGTGCT GGTGCGTTTC AAGGCTCTTG TCCCGCCCAT TGCCAAGGCT
CTTGAGAGCG CCGGGATACC TGTGTCCGTG CCGGAGCAGG AGTCCTTTTT TGTCGATGCG
CGGGTGGATC TTCTTTTGCG GATCGCCGGA AACGTGCTCG GACTGCCCGA CGCCGTGGAC
GAGCAGATTC CGTCCTGTCC CGAGGATGTG GTCGAGAAGG GACCGCTGGC CATGGCCGTC
CATTTCTCAG CGACCCCGCC GTTTGACGCC CTGTTCTGGA AGAGCAGGGC TTTTGTGGAT
CTGGTCAAGG CCTTCCAGGC CTGCTCGGGC TGGCGCGGAC TTTTGAACAT GGTCCGGCTT
GAGACCGAGC TTTGCGCCAT CAGGGCCAAG GCGCAGAAAG TGCAGATTAT GACCATGCAC
GGGGCCAAAG GGCTCGAATT CGAGGTCGTG TTCCTGCCCG GCCTGGAAGA GGGCATCCTG
CCTTTTGCGG GAATGGACAT GCTCCTTGGC AAGCCCGGCG ACGATCATGG GCTCGACATG
GACGAGGAAC GCCGCCTTTT CTACGTCGGC CTGACCCGGG CCAAATCCAT GCTTTTCCTG
AGCCACTCGG CCAGCCGCCG CGTTTTCGGC AAGACTTTGA AACTCGCCCT GTCGTCCCTG
GTGCGCCGTC TGCCGCAGGA CATGCTGCGT AAAAGCGCCA TCAAGCGCCA TGTGCGTCGT
AATGAACGGC AGCTGAGCCT TTTTGACCCG CATGCGCTTT AG
|
|---|
| Protein sequence | MNTFIADLHI HSKFSRATSK NLTPRNLLAW AGIKGIDVLA TGDFTHPGWM DIITRQLEAG
ENGLLRLRDD KALEQELPWY SGNMNAARIR FMLCTEISSI YKKRGKVRKI HNLVFMPSID
AALKFNTRLA QVGNLASDGR PILGLDAHDL LEMVLETDPL AYLVPAHIWT PWFSLFGSKS
GFDRIEDCFE DLSGEIFALE TGLSSDPEMN WMLSALDRFT LVSNSDAHSG EKLGREVTVF
SGERSFAGIR AALRRESETT RFEGTLEFYP EEGKYHLDGH RKCGVMLEPQ ETAAHRGFCP
VCGKPLTIGV LNRIFALSDR DLPVRPANHP GFSSLVPLTE ILSEILGVGP GTKKVLGMYN
QLVQDFGSEF SILRDVPEED LRRSSTVLAE AVRRMRQGVV HRHSGYDGEY GRISMFAPQE
LLEFKHGRML SMAARSAPPE VLGQRWRKTK GELSLLADEA VQTANEMQMA AILAGPGPVL
VLAGPGTGKT QTLMGRVRHL LAQGADPARI LILTFTRKAA RELKDRLQRL CPGLPVLPKT
DTLHALGLEY WTSVMGEAPI LLSEESSRRL FAAANPDLQG KELKTAWNEQ SLAREDGVRI
PGEHTRCYLD DKVRFNLVDY TDLLEFWLEH LELGQCVPDF DHVLVDEVQD LSALQLGLVT
ALCAQGGRGF FAIGDPNQAI YGFRGAVRDV EGRLRALWPD LKRIRLVHNY RSAQQILSLA
AHLFTEKQTL VAQKSVLASL VLFEAQSAEQ EAGWIAGRVR ELLGGTGHWQ ADTHEGKNIS
PGDIAVLVRF KALVPPIAKA LESAGIPVSV PEQESFFVDA RVDLLLRIAG NVLGLPDAVD
EQIPSCPEDV VEKGPLAMAV HFSATPPFDA LFWKSRAFVD LVKAFQACSG WRGLLNMVRL
ETELCAIRAK AQKVQIMTMH GAKGLEFEVV FLPGLEEGIL PFAGMDMLLG KPGDDHGLDM
DEERRLFYVG LTRAKSMLFL SHSASRRVFG KTLKLALSSL VRRLPQDMLR KSAIKRHVRR
NERQLSLFDP HAL
|
|---|
| |