Gene Dbac_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3116 
Symbol 
ID8378811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3526484 
End bp3527773 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content55% 
IMG OID645002351 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003159607 
Protein GI256830879 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGT CTAACGGGAT AGAGCAGTTT TTGCGGAGCA TGATGGCCAT CCTGGCCAGC 
AGAGCCATGA GCGCGGCCGA AAAACTGCAT TGCGGCGGCA TGCTTATCCA GACCAGGATC
AAAAGCCGTA ACGCCTCGGT CATGTTGTTC GACGAGGACA AGCAGGAACT CAAAGTCGTG
GCCGCCAGCA GACAGGAGAT AGTGGGGCTG ACTCAGCCCC TTTCTCCGGA AAGCATCTCC
GGATATGTTT GCACGCACAA AGCCCCGCTT TTGATCAAGG ATATCGAGAG CGACAGTCGC
TTTTGCTGCC GCAACGGCGG TTACAAGACT ACCTCGCTCA TTTCCGTGCC CCTGCTTTCC
GATCAGGAGC GGGTCATCGG GGTTATCAAT GTCTCCGACA AGGAAGGCGG CGGCCCCTTC
ACGGAGTCCG ACCTGTCCGC CCTGCTCGAA TACGCCGGGT GGATCACTCC CCTGATCGAG
AGTCTGGGAA TGTTCGAGAG GCTTGAGACG GAAAAAGAGC GCTATCAGGA ATTGGCGCAG
GAACTCGAAA TCAAGCAGAA AGAGCTGATC ATCGCCTCCA CCGAGCGCTC CGAACTGGTG
CAGATGGTGG TCCACGATTT CAAGAGCCCC CTTTCGGCCG TCATCTCCAA CATGGATCTG
TTGTCGTATC TTGGACCCAG TGAATCCCAG CAGCCGATCA TTGAAACAGC CTTTAAAGGC
GCGACCAAGC TTCTGGAAAT GATCGACGAG TTCCTGCACA TCGCGCGGGT CGACGAATGT
CAGGAGCGGG GAGTCATCCT GCGTCCGGTT TCTTTTTTGC CCCTGGTGCG CGGGCAGGTC
GAAGCGCTTA TGCCCTTGGC CCGTGAAAAG AACATGAGCA TTGAAAATCA GTGCGAACTC
GACGTTCACG TGCTGGGCGA TCCCATGCTT CTTGAGCATC TGGTCCAGAA CCTGATTTCA
AACGCCATCA AATATACGCC AAGCAACGGT CGGATCAGGA TCGGAATGGG CGCCTGGGAA
TCGCGCAGGA CCGCGGACCC CACGCATACG GTGCTTAAAT TCTGGGTCGA GGACAATGGC
GAGGGGATTG AAGACCGCTA CAAGGAATCC ATTTTCGACA AGTTCGTACG CACGGAAAAA
TCAGTTGAGA GCGGAATAAA AGGGACCGGA ATCGGGCTTT TCATCTGTCG CAAGATCGTG
AACATGTTTC AAGGCAAGAT CTGGGTGGAG GACGTCATTC CGCACGGCAG CAGATTTTGC
GTCATTCTTT TCATTCCCGG GGAAAATTGA
 
Protein sequence
MEQSNGIEQF LRSMMAILAS RAMSAAEKLH CGGMLIQTRI KSRNASVMLF DEDKQELKVV 
AASRQEIVGL TQPLSPESIS GYVCTHKAPL LIKDIESDSR FCCRNGGYKT TSLISVPLLS
DQERVIGVIN VSDKEGGGPF TESDLSALLE YAGWITPLIE SLGMFERLET EKERYQELAQ
ELEIKQKELI IASTERSELV QMVVHDFKSP LSAVISNMDL LSYLGPSESQ QPIIETAFKG
ATKLLEMIDE FLHIARVDEC QERGVILRPV SFLPLVRGQV EALMPLAREK NMSIENQCEL
DVHVLGDPML LEHLVQNLIS NAIKYTPSNG RIRIGMGAWE SRRTADPTHT VLKFWVEDNG
EGIEDRYKES IFDKFVRTEK SVESGIKGTG IGLFICRKIV NMFQGKIWVE DVIPHGSRFC
VILFIPGEN