Gene Dbac_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3115 
Symbol 
ID8378810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3525295 
End bp3526482 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content54% 
IMG OID645002350 
Productresponse regulator receiver protein 
Protein accessionYP_003159606 
Protein GI256830878 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA ATATCACCGT CATGGTGGTT GAAGATATCC TGTCTGCCCG GGAGACGGTT 
TTGAACTTGC TGAAAGCATT GGGTTTAACC CATTTTCTGG AAGCGGAAAA TGGCGAGGAG
GCTCTGGAAA AAATCAAGAA CAGCACCCCC GGCCTGATCA TTTCCGACTG GAACATGCCG
AAGATGAACG GCCTTGGCTT GTTGCGGGCT GTGCGTTCCC GGCCGGAATC GCCCTATATT
CCCTTTATTT TTCTGACTTC CAAATCCGAG GTGGAGGATG TGGCCCTGGC TTCGGATGGA
GGCGCTTCAG CGTATCTGGT CAAGCCTGTG ACCATCAAGG CTTTGGCCGA GGCCTTGAAC
ACGGTTTTCA ATGGCGGCTT TGAACAGGAT TTTGAACTGC TCAAAGTCGA GATCCAGAAT
TTGTGCGCGG CGAAGGAACA GGCCAAGGCC GTTGATCTGC TGCGTCGTTT TGAACTCCTC
TACCCTGCCC AGGCGCAGCG GATACGGCTT GCGCATGTGC GGGTGCTGAT GGAATTTTCG
GATTTTCCAA AGGCCGAGGA GATGCTGTGC GACATTCTGG CCTCAAACCC GCTCTTCGCC
CGAGGCTGGG AGGCCATGGC CAAGATCCAG TCCTGGCAGG GAATGTGGGA CCAGGCATTG
GCTGCTGCGG ACAAAGCTGT TTCCATCAGT CCGAACAATA CCGAATACCA TATCCTGCGG
GGCTCCATCA ATCTTCACAA GGAAGATCTG CACGAGGCCA GGAAAAATTT CATGACCGCC
CTCAACATCG ACCGTAAGAA CGATCAGATC AAGCAGGACA TCTGGAACGC CTATGTGGAT
CTGGACATGG TCGATGAGGT GCAGCGCGAT TTCGGCTCGT ACATTTTTTC ATCCCTGACC
TGCGACACCT TGAACAACAT GGCCGTGGCC TATCGGCGCA AGGGCGAGCT GGCCCGGGCT
GTCGAAATCT ACCGCGCGGC CCTGGCCAAG GAACCCGATA ATCCCAAAAT TCTGTTCAAC
GCCGCCGTGG CCTATGTGAA CAGAAAACAA TACGCTCGGG CCAAGTCGCT TCTGGCCCAC
GCCCTGGGCA ATGATCCCGA GTTCGAAAAA GCCAAGGCGC TCCTCAAACA GATCAGCGTT
CACGAGCACA AAAACGACGA AGCCGAGAAA TCCGGGGACC AAATATGA
 
Protein sequence
MDKNITVMVV EDILSARETV LNLLKALGLT HFLEAENGEE ALEKIKNSTP GLIISDWNMP 
KMNGLGLLRA VRSRPESPYI PFIFLTSKSE VEDVALASDG GASAYLVKPV TIKALAEALN
TVFNGGFEQD FELLKVEIQN LCAAKEQAKA VDLLRRFELL YPAQAQRIRL AHVRVLMEFS
DFPKAEEMLC DILASNPLFA RGWEAMAKIQ SWQGMWDQAL AAADKAVSIS PNNTEYHILR
GSINLHKEDL HEARKNFMTA LNIDRKNDQI KQDIWNAYVD LDMVDEVQRD FGSYIFSSLT
CDTLNNMAVA YRRKGELARA VEIYRAALAK EPDNPKILFN AAVAYVNRKQ YARAKSLLAH
ALGNDPEFEK AKALLKQISV HEHKNDEAEK SGDQI