| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3108 |
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| Symbol | |
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| ID | 8378803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3518304 |
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| End bp | 3519224 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645002343 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003159599 |
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| Protein GI | 256830871 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCGG AAAGGACGTC GGTTCAGTTG GTGGAGGTCG GGCGCGAGGA AAACGGCCGC
AAGCTCGTCT CCTTTCTGGA GGCCCGGCTG GGGACGCTTC CGACGGGCCT GTTCATGCGT
CTGGTGCGTA CAGGACAGGT GCGCATCGAC GGCCGCCGCT GCAAGCCCTT CGATCGCGTG
TTGACGGGAC AGACAGTGCG CGTTCCGCCC GTCACCGTGC AACGCAAGGA AAAGAGCCTG
CGCGATCTGC CGGGGCTGCG GGGAGTGTTC GAGAACGACG AGATGCTCGT GATCGACAAG
CTCGCCGGAT TGCCCGTTCA TGGCGGCACG GGCTGGACCG ACTCCGTGCA CGATCGGCTG
AAGGCCTGCT TTGCGGGGCA GGCCTTCGTG CCCATCCCTG TGCATCGCCT GGACCGCGAC
ACGTCCGGGC TTCTGCTCTG CGCCAAGACC CATGATTTTC TGCGTGCGAT GCACGCGTCA
TGGCCCACGC TGACCAAGGG CTATCTGTGC TGGGTGGAAG GGGCATGGGC AGCGGCCGGC
TGGCGGACGG TTGTTTCGGA GCTGGCCAAG GCCCAAACCG GAAGCGGTGA GCAGGTGGTC
TCCGGGCAGG GTAAGCGGGC CGTGTCCCAT GTTCATCCAG TGCTTGTGAC GGCTGGGAAA
AGCCTGCTGC TGGTCGTGCT CGGCACGGGG CGCACCCATC AGATCCGGGT TCATCTGGCC
GATTGCGGTC ACGCCATTGT CGGCGACCCC CGCTATGGCC AGGGCGGAGG GCTTCTTCTG
CATGCGGCCG CCCTTTCCTG GCCCGGACAC TCATTTTTTG TCCTGCCGCC CTGGCAGGAC
GAGTTTCGCA TCGACCCCGG TCATGCGCAG GACATCAAGA ATATTCTCGC CGCAGCTCCC
GCCAAGGAGG GAACCATATG A
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| Protein sequence | MQSERTSVQL VEVGREENGR KLVSFLEARL GTLPTGLFMR LVRTGQVRID GRRCKPFDRV
LTGQTVRVPP VTVQRKEKSL RDLPGLRGVF ENDEMLVIDK LAGLPVHGGT GWTDSVHDRL
KACFAGQAFV PIPVHRLDRD TSGLLLCAKT HDFLRAMHAS WPTLTKGYLC WVEGAWAAAG
WRTVVSELAK AQTGSGEQVV SGQGKRAVSH VHPVLVTAGK SLLLVVLGTG RTHQIRVHLA
DCGHAIVGDP RYGQGGGLLL HAAALSWPGH SFFVLPPWQD EFRIDPGHAQ DIKNILAAAP
AKEGTI
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