| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3097 |
|---|
| Symbol | |
|---|
| ID | 8378792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3507040 |
|---|
| End bp | 3508320 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645002332 |
|---|
| Product | Sigma 54 interacting domain protein |
|---|
| Protein accession | YP_003159588 |
|---|
| Protein GI | 256830860 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0470073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGCG CGCAGGTCGA AGTGGCGCTC ACGCAGGCAT TTTCCGCCGA GGAGCTGGAC
AAATGGCGCG CATCCCTGGG TTTGAGCGTG GAGGGCTCCG TGCTCACGGT GCGTTTCCCG
CACAGATATT TTTCCGATTG GTTTGAAACG CACGCGCGGG TCCGTTTCGA GCAGGCCCTG
GCCGGTTCGG GGCTGAGCAT CGCCTACGAA TGCCGGGACA GAAGTCGCTC CCGCATCGTG
CGCGAGTCCC GGCCGGCGGG TCAGGCCCTG CCCTTTGGCT CCGAGTTCAT TTTCGACAAC
TTCCTGGTCA ACAACAAGAA CTACTTCCCG CTGGCTTCGG CCCAGGAAGT GGCCCAGAGC
CGGGAAGCTC CGTACAACCC GTTTGTGCTC TGCGGGGAAA GCGGGTCGGG CAAGTCCTTT
TTGCTGCGGG CCATTGCCAA CGCCAGGAGC GAACATGGCG CGGACGGGTC TTACGTGGGC
GGCATCGAGG ATCTGCACGA GCTGTACTCG TCCCGGTCCG ATGCGCGAAA ATTTTTGACC
TCGATGCAGC TTCTGGCGGT GGACGACCTG CAGGAGATTG CCCGCTATCG CTACCTGCAG
GGCGAGCTTT TGGCGCTCTT CGATCACTTC CATCTGCAAC GCAAGCAGAT GGTTTTTGCC
TGCACGGGCA AGGTCGGAGG GTATACGTTT CTGGCGCCCA AGCTCAAGTC GCGTCTGGAG
TGGGGCCTCA GCGTCATGCT CAAGGCCCCG GATCTGGATA TCCGCACCCA GTACGCCCAG
TCCCGTTGCC GGGAGCGCCG CCTGGATCTC TCCAAGGACA GAATCCTGCT CCTGGCCCAG
CGGTTTGCCG ATCTGCGCAA TCTGGAAGGG TGTCTTTTGA AGCTGTGGGC CTACCGGGAG
CTGGTCCATG ACCATATTTC CGATGAAGAG TTTGACAATA TTCTCAATTA TCTGGACGAT
CGGGCCGTAA CGAGCCTGAG CGTCGAACAG ATTCTGGATG CGGTGTGCTC CAAATTCAAC
CTGAAGCCGG AAGATATCCT GTCCTCCGGC CGCAGGCACG ACCTTGTTTT TGCCCGGCAG
GTGGCCATGT ACCTGTGCCG CAAACACCTC GGCCTGTCCT TTCCGGAGCT TGGTCGGGCT
TTTGGCGGTA GAGACCACTC GACGGTCCTG TATAGCTGTC GAAAAGTCGA ACAATTACAA
AGAGATGATA AAAGCATAAA AAACATGTTA CATGAGCTGA GCGATAAATG CCTGGCCATG
AACGAAACAA CCCTTGCCTA G
|
|---|
| Protein sequence | MNGAQVEVAL TQAFSAEELD KWRASLGLSV EGSVLTVRFP HRYFSDWFET HARVRFEQAL
AGSGLSIAYE CRDRSRSRIV RESRPAGQAL PFGSEFIFDN FLVNNKNYFP LASAQEVAQS
REAPYNPFVL CGESGSGKSF LLRAIANARS EHGADGSYVG GIEDLHELYS SRSDARKFLT
SMQLLAVDDL QEIARYRYLQ GELLALFDHF HLQRKQMVFA CTGKVGGYTF LAPKLKSRLE
WGLSVMLKAP DLDIRTQYAQ SRCRERRLDL SKDRILLLAQ RFADLRNLEG CLLKLWAYRE
LVHDHISDEE FDNILNYLDD RAVTSLSVEQ ILDAVCSKFN LKPEDILSSG RRHDLVFARQ
VAMYLCRKHL GLSFPELGRA FGGRDHSTVL YSCRKVEQLQ RDDKSIKNML HELSDKCLAM
NETTLA
|
|---|
| |