Gene Dbac_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3087 
Symbol 
ID8378782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3493040 
End bp3493921 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content59% 
IMG OID645002322 
ProductATP phosphoribosyltransferase 
Protein accessionYP_003159578 
Protein GI256830850 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase
[TIGR03455] ATP phosphoribosyltransferase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATG GAAAACAGAT GCGCATCGGA ATACCGAAGG GTTCCCTGGA AGAGGCCACA 
GTCAAACTTT TCGCCAAGGC CGGCTGGAAG GTGACCTCGC ACCACCGGAA CTACTTCCCG
GAAATAAACG ACCCCGAATT GACCTGTTCA CTGTGCCGGG CCCAGGAAAT GGCCCGCTAT
GTGGAAAACG GTCTGCTCGA CGCCGGCCTG ACGGGCAAGG ACTGGATCCT TGAGAACCAG
TCGGACGTCG TCATCGTGGA CGACCTGATT TATTCCAAGG CCAGCAATCG TCCGGCCAAG
TGGGTCCTGG CCGTGGCCGG CGACTCTCCG TACAAGCGGC CGGAAGATCT GGCGGGCAAG
AAAATTGCCA CGGAATTTTT GAGCTTCACC AAGCGCTATT TCGAAGAAGC GGGAATCCCC
GTCGAGGTGG AATATTCCTG GGGCGCCACC GAGGCCAAGG TTGTGGAAGG GCTGGTGGAC
GCCATCGTCG AGATCACCGA GACGGGCACG ACCATCAAGG CCCACGGCCT GCGCATCATC
GCCGAGCTCT TGCAGACCAA CACCCAGCTC ATCGCCAACA AGGAATCCTG GAAGGATCCC
TGGAAGCGGG CCAAGATCGA GAACATGAAC ACCCTTCTGC AGGGCGCGCT GCGGGCCGAC
AAGCTGGTCG CGCTCAAGAT GAACGCCCCG GCCGACGTCG TGGACAAGGT CATGGCGCTT
CTGCCGAGCA TGAACTCTCC GACCATAGCC CATCTGCACA ACTCCGACTG GCTGTCCATC
GAGACCGTGG TCGAGACCTG TCAGGTCCGG GATCTGGTTC CGAAGCTGCA GGCCGTGGGT
GCTCAGGCCA TCATCGAGTA TTCCCTGAAC AAGGTCATCT AA
 
Protein sequence
MVDGKQMRIG IPKGSLEEAT VKLFAKAGWK VTSHHRNYFP EINDPELTCS LCRAQEMARY 
VENGLLDAGL TGKDWILENQ SDVVIVDDLI YSKASNRPAK WVLAVAGDSP YKRPEDLAGK
KIATEFLSFT KRYFEEAGIP VEVEYSWGAT EAKVVEGLVD AIVEITETGT TIKAHGLRII
AELLQTNTQL IANKESWKDP WKRAKIENMN TLLQGALRAD KLVALKMNAP ADVVDKVMAL
LPSMNSPTIA HLHNSDWLSI ETVVETCQVR DLVPKLQAVG AQAIIEYSLN KVI