Gene Dbac_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3081 
Symbol 
ID8378776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3485996 
End bp3488494 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content64% 
IMG OID645002316 
ProductIndolepyruvate ferredoxin oxidoreductase 
Protein accessionYP_003159572 
Protein GI256830844 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG TGAAGGCGAT GTGCGTCGGC GACGCGGGCA AGGGTGTGGT CATCCAGGGT 
AATATGGCCT TTGCGGTGGG GTGCGTACGG GCCGGGATCC ATGCCGCGGA CGGCTATCCC
GGTACGCCCA GCACCGAGGT CATCGACAAG GGCCTGTCCC AGGTCCAGGA CATGATTACC
GTGGGCTGGT CCGTGAACGA GGCCGTGGCA GCGGGCGTTG GTTTTGGCCA CACCCTGGCC
GGCAGCGACT GCGTCGTGAC CATGAAGATT CCGGGCCTGT TCCAGGCCGC CGACGTGATC
ACTTCCGCCG CTTTCTACAC CGGCGAGCGC GGCAGTCTCG TCTACTATAT CGCCAGTGAT
TATACGCCAA GCTCCACCCA GCATCTGGTC GATCCGCGCT ACATGCTGAA AAGCTGCTGC
ATTCCGGTCT TCGAGCCGCG CAATCACCAG GAAATGCACG AGGCGGCCCG TATCGCCGCC
GACCTTGGGC GGCAGTTCAA CACTCCCGTG GCCGTCATCG CCAGCGGGGT GCTCTGTCAC
AGCGAAGGGC TGGTGCGCCT GATGGAAACG GCCACGCGCG AAAAGGCCCC GCTGCCGGAG
AAGATGAGTG ATTTCATTAC CCTGCCCGTG CGGGCGCGGA TGTTCCACGA CCAGGTCCGC
ACGACCCGTA TCCCGGCCCT GCGCAAAATG GCCGAGGAGA GCCCGCTCAA TGTCCTGACC
AGGGGTGACG GCAAGATCGG CATCATCACC CATGGCGTGA ACGACCTCTT TGTGGAGGAA
GTCCGGGCCG CCACGGGCAA GAATATCGAT GTCCTGTCCC TGGGCTTCAC CTACCCGCTG
CCCATGGATC TCATCCGCCG CTTTTGCGAG AGCATCGACG GTCCCGTCTA CGTCATCGAA
GACGGCTATC GTTTCATTCA GGAGGCTATC CAGGCCGAAG GAATCGCCGT CCAGGGCAAA
GGGGCGGACG AGACCGTTAC GGAATGGACT CCGGCGCTTA TTTCCACCCG CCTGGGCCTG
GCCGAGGCGG CCGGGAAGTC GGCGGTGGCC AGTCTGCCGC GGCCGCCCAT GATCTGTGCG
GGATGTCCGT ATCGCCTTTT CGGTCAGATC GTCGGCAAGA TGCGCAAGAA GGGCAAACTT
GAAGCCGTAT TCGGCGACAT CGGCTGCAAT ACGTTGCTGC ATTTCCTGAA TGCCATGGAC
ACCGCTCTGG CCATGGGCGC GAGTGAAGCC AAGCGGCTGG GCTATGTCCT GTCCCGGCCC
GAGGCCGCAA GCAAATGCCT GGCCGTGCTT GGTGACGGCA CCGAGTGTCA CAGCGGCATG
GATGCGACCC GCAATACGAT TTTCAGGAAC ATCCCCGGCG TCAAGGTCGT CCTGAACAAC
AACTGGACCG CCATGACCGG TGGCCAGCCC TCGCCCACCT CGCCCGCCAA CCTGGCCGGG
GACCCCAACG TCTTCGACCT GAACGCGAGC CTGAAGGCCC ATGGGGCGAA TGTGGTCGAG
GTCAGCGGCT ACGACAAGAA AGCATTGGAA AAGGCCCTGA AAGAAGCCCT GACCGCCGCC
GAGACCGGCA CCTTCACGAC GCTGGTGGTC ACGGGCGTGT GCATCCGCAA GATGCCCAAG
GAATCCTACG GCGTGAAAAT GGCCGTGGAT CCGGAGCTGT GCATCCGCTG CGGCATGTGC
CAGATCTGTT CCGGCATCGA GGCCGACGCC GAAGGGTTGC CTTTCTTCAA CAATATCTGC
ACCGGCTGCG TGAGCCAGAA CCCGGCCTGC GCCCAGATGT GCCCCAAGGG CGCCATCGCC
CCGGCCAAAG ACCAGAGCGC CTGCGGCCTG ACCACCTGTC CGGATCTGCC CGTGCCGCCC
GAAAGTATCG ACCTGCCGGA TACAGGCGGC CTGCCGCCCT TTTTGTCCGT GGCCATCCGT
GGCGTGGGCG GTCAGGGCAA CCTCTTCTTC GGCCGCGTCC TGACCCAGCT GGCTTACCTC
CTGGGCTACG ACAAACAGAA CATCGTCAAG GGCGAGACCC ACGGCATGGC CCAGATGGGC
GGTCCGGTCA TCAGCACCTT TGCCTGCGGC GCGGTCCATT CCCCCGTGCT CATGCCCGGC
ACCACCCAGT GCCTGGTCTG CATGGAACGC AGCGAAGTGT TCCGTCCCGG CTTCCTGGAC
ATGCTGAGGC CCGGCGGTAC GGTCATCCTG GCCAACACGG CCATCATGCC TCCGCTCTTC
AAGGCCGAGA ACTATCCGAC GGTGGAGGCC GTGCGCGAGG CCTTGAGCGG GTACAAGGTC
ATCGACGTCG ACGTGCTCGG CACGGCCCTG GGCCTTGGTG ACCCCACGGG CCGCAGCGCC
AACGTGGTCA TGATCGGCGT CTTAAGCACC TTGGCTCCCT TCGATTCCTT CCCCAACGAG
TACTGGCTAA GGGCCCTCAA GAACGTCAGC CCCAAGCCGG CCATCTGGCA GGCCAACTAT
GCGGCCTTCC TGGCCGGGCG TAAGCTGGGC GGGAAATAG
 
Protein sequence
MSAVKAMCVG DAGKGVVIQG NMAFAVGCVR AGIHAADGYP GTPSTEVIDK GLSQVQDMIT 
VGWSVNEAVA AGVGFGHTLA GSDCVVTMKI PGLFQAADVI TSAAFYTGER GSLVYYIASD
YTPSSTQHLV DPRYMLKSCC IPVFEPRNHQ EMHEAARIAA DLGRQFNTPV AVIASGVLCH
SEGLVRLMET ATREKAPLPE KMSDFITLPV RARMFHDQVR TTRIPALRKM AEESPLNVLT
RGDGKIGIIT HGVNDLFVEE VRAATGKNID VLSLGFTYPL PMDLIRRFCE SIDGPVYVIE
DGYRFIQEAI QAEGIAVQGK GADETVTEWT PALISTRLGL AEAAGKSAVA SLPRPPMICA
GCPYRLFGQI VGKMRKKGKL EAVFGDIGCN TLLHFLNAMD TALAMGASEA KRLGYVLSRP
EAASKCLAVL GDGTECHSGM DATRNTIFRN IPGVKVVLNN NWTAMTGGQP SPTSPANLAG
DPNVFDLNAS LKAHGANVVE VSGYDKKALE KALKEALTAA ETGTFTTLVV TGVCIRKMPK
ESYGVKMAVD PELCIRCGMC QICSGIEADA EGLPFFNNIC TGCVSQNPAC AQMCPKGAIA
PAKDQSACGL TTCPDLPVPP ESIDLPDTGG LPPFLSVAIR GVGGQGNLFF GRVLTQLAYL
LGYDKQNIVK GETHGMAQMG GPVISTFACG AVHSPVLMPG TTQCLVCMER SEVFRPGFLD
MLRPGGTVIL ANTAIMPPLF KAENYPTVEA VREALSGYKV IDVDVLGTAL GLGDPTGRSA
NVVMIGVLST LAPFDSFPNE YWLRALKNVS PKPAIWQANY AAFLAGRKLG GK