Gene Dbac_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3077 
Symbol 
ID8378772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3480281 
End bp3480901 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID645002312 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003159568 
Protein GI256830840 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACG TCATCCATTA CCCGCTTTTC ATCATCACGG CTGTGACCCT GAACCTCTAT 
CCCGGCCCGG ACACCATCTA CATCCTGACC CGCAGCACGG CCCAAGGCCG CGCCGCAGGC 
GTCGCCTCGG CCCTGGGGAT CTCCAGCGGG TGCGTGATCC ACGCGCTGCT CGGGGCCTTG 
GGGCTGGCCG CCGTGGTCAT GGCCTCGGCC ACGGCCTACC AGATGATCAA ATGGGCCGGG 
GCGGTCTATC TCGTCTATCT TGGCCTGACC ATGCTGCGGG CGTACGGCCA TGACGCGGCC 
CATGCGGTAT CGACCAAACA ATCTACGGGC CGCATCTATG TCCAAGGCGT GATAACCAGC 
CTGCTCAATC CCAAGGTGGC GCTCTTCTTC CTGGCCCTCA TCCCGCAGTT CATCGCGCCG 
AGTGCCGCCC ATCCCGGCCT GTCCTTTCTG GCGCTGGGCT TGACCTTCGT CGCCACCAGC 
ACGCTGTGGA GCCTTGTCCT GGCAATGGCC GCCGGAGCAT TTCATCGGCG ATTGGCGAGC 
GGTCCGGGAG CCCGCTGGCT CAAGCGCCTG GGCGGAGGTC TGCTGATCGG GCTGGGCGCC 
CGGCTGGCTT TTTCCAAGTA G
 
Protein sequence
MIDVIHYPLF IITAVTLNLY PGPDTIYILT RSTAQGRAAG VASALGISSG CVIHALLGAL 
GLAAVVMASA TAYQMIKWAG AVYLVYLGLT MLRAYGHDAA HAVSTKQSTG RIYVQGVITS 
LLNPKVALFF LALIPQFIAP SAAHPGLSFL ALGLTFVATS TLWSLVLAMA AGAFHRRLAS 
GPGARWLKRL GGGLLIGLGA RLAFSK