Gene Dbac_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3065 
Symbol 
ID8378760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3467179 
End bp3469038 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content65% 
IMG OID645002300 
Productfumarate reductase flavoprotein subunit 
Protein accessionYP_003159556 
Protein GI256830828 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGT ATTATTCCGA TCTTCTGGTC ATCGGCGCGG GCCTTGCCGG CGAACGCGTG 
GCCGTGGAGT CCGCGCTGGC CGGCTTCAAC GTCATCTGTC TGTCCATCGT CCCGGCCCGC
CGGTCCCATT CCTCCGCTGC CCAGGGCGGC ATGCAGGCGG CCCTGGGCAA CTGCGCCATG
GGCGAGGGTG ACAATGTAGA TGTGCATTTC ATGGACACGG TCAAGGGCTC GGACTGGGGC
TGCGACCAGG AAGTGGCCCG GCTCTTCGCC GACGCCGCGC CCATCGAGAT GCGCCGCCTG
GCCCATTGGG GCGTGCCATG GAACCGGGTG GTCCCGGGCA CATCCTCCTA CTTCAAGGGT
GGCGAGAAAT TCGAGAAATT CGAAAAACCC GAGAAGGAAG GCCTGATCAC GGCCCGCTCT
TTCGGCGGCA CGGCCAAGTG GCGCACCTGC TACACCTCCG ACGGCACGGG CCACGCGGTC
ATGTGCACCA TGGACAACAA GTGCGCGGAG CTGGGCATCA ACGTCCTCGA TCGCAAGGAA
GCCATCTCGC TCATCCATGA CGGCGAGCAG TGCATGGGCG CCATCGTGCG CTGTCTGCGC
ACCGGCAAGC TTGAAACCTA TCTGGCCAAG GCTACGGCCA TCTGCACCGG CGGCTTCGGG
CGTCTCTACA AGGCCACGAC CAACGCGGTC ATTTGCGACG GCGGCGGCCA CGTCATCGCC
CAGGACACGG GCGTGGTGCC CATCGGCAAC CCCGAGGCCA TCCAGTTCCA CCCCACGGGC
ATCGTGCCCA CGGACATTCT GGTCACCGAG GGCTGCCGCG GCGACGGCGG GACGCTCCTT
GATGTCAACG AAGAACGCTT CATGCACATC TACGAGCCCG AGAAGGCCGA GCTGGCCTCC
CGCGACGTTG TCTCGCGGCG CATGACCGAA CACATGCGCG CCGGAAAAGG CGTGCAGTCG
GCCTATGGCG AGCACCTCTG GCTCGACATC CGGCACCTTG GCGACAAGCA CATCTCCACC
AAGCTGCGCG AGGTGGACGA GATCTGCCAG AACTTCCTGG GCGTGGACGC CCGCACCCAG
CTCATCCCCG TGCGCCCGAC CCAGCACTAC ACCATGGCCG GGGTGCGCAC GGACAAGAAC
GGCGCGGCCT ACGGCCTTAA AGGCCTCTTC TCCGCCGGCG AGGCGGCCTG CTGGGACATG
CACGGCTTCA ACCGCCTGGG CGGCAACTCC CTGGCCGAGA CAGTGGTCGC GGGCGGCATC
ATCGGCGTCA AGATCGTCGA ATTTTTGAAG GGCTACGAGA CGTCTTTCAA GACAGGCGTC
ATCAATGCCG AGGCCAAACG TCAGCAGGAG CGTATCGACA ACCTGATCAG CGGCCGTCTG
GGCAAGGAAA ACGTCTACAA GGTCCGCGCC GAGATGCAGG AAGCGCTCAT GCAGGGCTGC
TTCGTGTTCC GCAATGAAAA GGATCTAACC ACATGCGTCG AGGTGCTGCA GGGCTTGCTT
GAGCGCTCCG GCAGGATCGG CCTGGTCTCC AAGGGCCTTG GGGCCAACCA CGAAGTTGCG
GCGGCGCTCA AGATCCAGGG CCAGGTCCGC CTGGCCATGT GCATCGCCCA GGCCGCCCTG
GTGCGCCGGG AGAGTCGCGG CAGCCACAAC CGCGAGGACT TCCCGGCCCG CGACGACCAA
AACTGGCTGA ACCGCACCCT GGCCTATTGG CCCGAAGGAC AGACCATGCC CGAGCTGAAA
TACGAAGAGG CGACCCCGCA CTTCGAGATT CCTCCGGGAG AGCGCGGCTA TGGCGGCGGC
AAGATCATCC ATGCCGACCC CAAGGAAATC GAGGCCAAGA CCATCACGAA GAGCAAGTAA
 
Protein sequence
MQTYYSDLLV IGAGLAGERV AVESALAGFN VICLSIVPAR RSHSSAAQGG MQAALGNCAM 
GEGDNVDVHF MDTVKGSDWG CDQEVARLFA DAAPIEMRRL AHWGVPWNRV VPGTSSYFKG
GEKFEKFEKP EKEGLITARS FGGTAKWRTC YTSDGTGHAV MCTMDNKCAE LGINVLDRKE
AISLIHDGEQ CMGAIVRCLR TGKLETYLAK ATAICTGGFG RLYKATTNAV ICDGGGHVIA
QDTGVVPIGN PEAIQFHPTG IVPTDILVTE GCRGDGGTLL DVNEERFMHI YEPEKAELAS
RDVVSRRMTE HMRAGKGVQS AYGEHLWLDI RHLGDKHIST KLREVDEICQ NFLGVDARTQ
LIPVRPTQHY TMAGVRTDKN GAAYGLKGLF SAGEAACWDM HGFNRLGGNS LAETVVAGGI
IGVKIVEFLK GYETSFKTGV INAEAKRQQE RIDNLISGRL GKENVYKVRA EMQEALMQGC
FVFRNEKDLT TCVEVLQGLL ERSGRIGLVS KGLGANHEVA AALKIQGQVR LAMCIAQAAL
VRRESRGSHN REDFPARDDQ NWLNRTLAYW PEGQTMPELK YEEATPHFEI PPGERGYGGG
KIIHADPKEI EAKTITKSK