Gene Dbac_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3048 
Symbol 
ID8378743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3446038 
End bp3447255 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID645002283 
Productammonium transporter 
Protein accessionYP_003159539 
Protein GI256830811 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCCGA CAGATACCGC TTTTATCATT GTTTGTGCTG CCCTGGTCAT GTTCATGACT 
CCCGGGCTGG CTCTCTTTTA CGCGGGCATG ACCCGTTCCA AAAACGCCCT GGGAACCATA
ATGCAAAGTT TTGCATCCCT TGGCGTCATC ACCCTGGTCT GGATTTTCTG GGGATATTCC
CTGTCGTTTG GAACTGATAT GAACGGGCTC ATCGGCGGCT TTGATTTTAT CGGCATGGCC
GGAGTGGGCA TGGAGCCGCA CGAGTCCATA GCCACCAACC TGCCGCACAT GGTCTTCATG
ATCTTTCAGT GCATGTTCGC CATCATCACC CCGGCGCTGA TCACCGGCGC CTTTGCCGAG
CGCATGCGGT TTTCCGCGTT TATCATTTTC ATCATCCTGT GGTGCACTTT CGTCTATGCC
CCGTTGTGTC ACTGGGTCTG GGGCGGAGGC TGGATGGCCC AGATGGGCGC CATGGATTTT
GCCGGCGGAG CGGTGGTACA TATGAGCTCG GCCAGCGCGG CCCTGGCAGC GGCGCTGGTC
ATCGGCAAGC GCAAGGGCTA CGGCAAGCGC TCCTTTTTGC CGCATAACCT GCCCATGACC
ATGATCGGCA CGGCGCTCTT GTGGTTCGGC TGGTTCGGTT TCAACGCCGG CAGCGCACTG
GCCGCGAACG GGCTGGCAGG CAACGCCTTT GTCACCACGC ATGTCGCGGC CGCAACGGCC
ATGCTTGCCT GGGTTTTTGC GGAATGGAAG TTCCACGGCA AGCCCACGAC CCTGGGCGCG
GCTTCCGGCG CGGTGGCCGG TCTTGTTGCC ATCACCCCGG CGGCTGGTTT TGTCGGCATC
ATGGCTTCCG TGATCATTGG CCTTGGCGCC GGAGTGCTGT GCTATTTCGG CGTGAGCCTC
AAAGCCCGCT TTGGTTACGA CGACAGCCTT GATGTGGTCG GCATTCACGG CGTGGGCGGC
ATCTGGGGCG CCCTGGCCAC CGGTCTTTTT GCCAGTCAGG CCATCAACCC CGCCGGTTTC
AACGGTCTTT TTCACGGCAA TCCCGGCCAG CTCTGGATCC AGTTCGTATC CGTCGTGGCC
ACCTGCGCCT TTTCTTTTGT GGTCACCTAT GTTTTGCTCA AGATTGTTAA TGCCATCGTG
CCCATTCGTG TCACCGAAGA AGAGGAAGAG GCTGGGCTTG ACGTGGCTAT CCATAGCGAA
TCCGCTTACC AGGCTTAA
 
Protein sequence
MNPTDTAFII VCAALVMFMT PGLALFYAGM TRSKNALGTI MQSFASLGVI TLVWIFWGYS 
LSFGTDMNGL IGGFDFIGMA GVGMEPHESI ATNLPHMVFM IFQCMFAIIT PALITGAFAE
RMRFSAFIIF IILWCTFVYA PLCHWVWGGG WMAQMGAMDF AGGAVVHMSS ASAALAAALV
IGKRKGYGKR SFLPHNLPMT MIGTALLWFG WFGFNAGSAL AANGLAGNAF VTTHVAAATA
MLAWVFAEWK FHGKPTTLGA ASGAVAGLVA ITPAAGFVGI MASVIIGLGA GVLCYFGVSL
KARFGYDDSL DVVGIHGVGG IWGALATGLF ASQAINPAGF NGLFHGNPGQ LWIQFVSVVA
TCAFSFVVTY VLLKIVNAIV PIRVTEEEEE AGLDVAIHSE SAYQA