Gene Dbac_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3046 
Symbol 
ID8378741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3443142 
End bp3445643 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content57% 
IMG OID645002281 
ProductUTP-GlnB uridylyltransferase, GlnD 
Protein accessionYP_003159537 
Protein GI256830809 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2844] UTP:GlnB (protein PII) uridylyltransferase 
TIGRFAM ID[TIGR01693] [Protein-PII] uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG AAACCTTACG CCTGGCCCGG GATCTTTACC GCAATTCGGA CGCGGACCCG 
GGCCATTCTC CTGCCTGGTT TTCCGCACGC ATGGACGACT GGGTCCGCGA GGCCTGCGAA
GGCCGTCTTG CTCCCGCCGG GAGTACGCTG GTGCTGGCCC TTGGCGGCTA TGGGCGCGGC
GAGCTTTTTC CATTTTCCGA CATTGATCTC TTGGTGTGTC TGCCTGAAGC GGACGCGCCC
GATCCCCAGT TTCTGGCCGA GGCCCTGTTC CTTCCATTGT GGGACAGCGG TTTTGATGTC
GGGCACGGCA TCCGAAGTGT CAGCGAGACC ATCACCCTGG CAGCGGCCGA TTTTGAAGTC
CTCTGTTCGC TTCTTGATGC GCGGCTTCTC TACGGTTCGG CGGATCTGTT TTCCGATTTT
CAGCGTACCG TCACGCAGAA CCTTGTCATC CCTTTGCACG CCGAGCTTGT AGGCTGGCTC
GCAGGCCGTC ATGAATCGCG GCACAGGCAG TTCGGCGACA CCACGCATCT TTTGTCACCA
AATCTCAAAG AGGGCAGGGG CGGGCAGCGC GACCACCAAA CCACGCAGTG GCTGGAGATC
CTGTGTCGCG CCGCAGGAGA CGATTCGCCT TTTCTTTCGT CTTCCGAGCG GGAGGCTTTG
TCGCAACGCG TCGGTTTTCT ATCTCTTGTT CGAGTTGCTC TGCACCGGGT CAGCAAGCGC
AAGAATGATG TCCTGCATCT GGAATTACAG CCGGAGATAG CGCAAAGCAT CGGTTTCGGC
CCTGCCAATG ACCGAGACTC GGTGGAAAGG TTTCTCTCGG AACTGCATAA GACCATGGCC
GAGATAAAGC TTCTTTGCCG CCTCTGTCTG GACAAGGTTC GGGGTTTGGC TGGAACGCGC
GTCTCTGGAG CGTCCAATGT CGAGACGGGC CTCGACTTTT CCATTCTGGT TGCAAATCCT
GCCAACATTA TTGAACTTTT TCGGCATAGC GCGCAAACTG CAATTCCCAT TGGCTGGCAC
ACCCGCCGTA TCATTCAGGA TCGCTTTCCC GCGCTATCCA TGGCTCCGAA CTGGCAGGTG
CCGATAGTTT CCCGTTTCGA AGAGATTTTG TGCAGTGCTT ATGCTGCGCA CGCCCTTGAT
CAGATGCTTG AAATCGGTTT TTTGAACCTT TTCGTGCCCG AGTTTGCCGC CATTGAGCAT
CTGGTTCAGT TCGACGCCTA TCACAAACTG CCTGCCGGAC CGCATCTGGT GGAGACGGTG
CGGAATCTGG CGTCCTTTGA TTTGGGCCAT GAATTTCTGG GTGATTTTCT TTTTCCCCAA
TCAAGCGACC CCTGTCTGCG CTGGGCCGCG CTGCTGCATG ACATCGGCAA GGGTAACGGT
GATCATGCGG CCAAGGGCGC GCAGCTCTCG CGCCAGATTC TGGGCCGATT GGGCTATGAC
GACAATTTTG TTCATGAATG CGCTTTTTTG GTCGAACATC ATCTACTTCT TGTGCACACG
GCCACGCGTC ACGATCTGGG AGAGGAGTCC GTCATCATGG AGCTTGCGCA GACCCTTGGA
TCTTTGCGCC GCTTAGACCG ATTGACCCTG CTGACCTGGG CCGATTCCAT GGCCACCGGT
CCCAAGGCCT GGAATCCCTG GATCGAGAAT TTACTGCGGG AAACCTATTT CAAGACGCGC
AAGGTCCTTG AACATGGAAT CATGTCCGAT GAAACCCTGG TGCACAGATT GAGCACGCTA
CGCGATTCAT TGCGCTCCAA CCGTCCGCAG CATTTTTCAA TCCGGGACTT CGAGGGATTT
CTCGCCGTCA TGCCGGCCAG GTATCTGATG CAAACCGCGC CGGGACGCAT CATCGATCAT
ATCCAGCAGG TGCACCTCTT CCGAGGATGC CCGGATACCG CTCCTTTTCG ACTTTCCTGG
GAGCACCGGC CCCAATCGAG ATCGTTGCGC GTGACGCTGG TTTCCACCGA CAGGCCGGGC
CTTTTCGCCC GTGTCTGTTC GGCTTTGGCC AAGCATGGCA TGTCCGTGCT TGGGGCGGAG
CTGTGCGTCT GGGATGACAA GACGGTCGTG GATGTGTTTT GGGTCACGGA ACCCTTGGAC
ATGCTTTATG CCGAGCAGAC GGTCGAGGCC TTTGCTTCCA GCCTGGCGCA GCTTTTTGCC
GACGAGACGA AGCTGGATCA GCTTCCTGTG CGCATAACCT CCAGGCTGAA GAAGGTTTAT
GCGCTGGACC GCGACCTGGT GCGAGTAGCG CTGGACAACG GCGTCTCGGA TTTTCACACC
GTGCTTTCCA TTCAGGCTCC CGACGTACCC GGCCTTCTGG CGACGGTTTC GCTTTGTCTC
TACCGGCTGG GGGTTGACCT GGTCTTTGCC AAGATCGCGA CACAAAAAGA CAAGGCCATG
GATATTCTGC ATATCCGAGA AGGCGGAGAA AAGATCCCCG ATTCGGAATG CGAATCCCTC
GCGCGGACCC TCAGGCTTCT CATCAGCAGC CTGTACGTCT GA
 
Protein sequence
MSIETLRLAR DLYRNSDADP GHSPAWFSAR MDDWVREACE GRLAPAGSTL VLALGGYGRG 
ELFPFSDIDL LVCLPEADAP DPQFLAEALF LPLWDSGFDV GHGIRSVSET ITLAAADFEV
LCSLLDARLL YGSADLFSDF QRTVTQNLVI PLHAELVGWL AGRHESRHRQ FGDTTHLLSP
NLKEGRGGQR DHQTTQWLEI LCRAAGDDSP FLSSSEREAL SQRVGFLSLV RVALHRVSKR
KNDVLHLELQ PEIAQSIGFG PANDRDSVER FLSELHKTMA EIKLLCRLCL DKVRGLAGTR
VSGASNVETG LDFSILVANP ANIIELFRHS AQTAIPIGWH TRRIIQDRFP ALSMAPNWQV
PIVSRFEEIL CSAYAAHALD QMLEIGFLNL FVPEFAAIEH LVQFDAYHKL PAGPHLVETV
RNLASFDLGH EFLGDFLFPQ SSDPCLRWAA LLHDIGKGNG DHAAKGAQLS RQILGRLGYD
DNFVHECAFL VEHHLLLVHT ATRHDLGEES VIMELAQTLG SLRRLDRLTL LTWADSMATG
PKAWNPWIEN LLRETYFKTR KVLEHGIMSD ETLVHRLSTL RDSLRSNRPQ HFSIRDFEGF
LAVMPARYLM QTAPGRIIDH IQQVHLFRGC PDTAPFRLSW EHRPQSRSLR VTLVSTDRPG
LFARVCSALA KHGMSVLGAE LCVWDDKTVV DVFWVTEPLD MLYAEQTVEA FASSLAQLFA
DETKLDQLPV RITSRLKKVY ALDRDLVRVA LDNGVSDFHT VLSIQAPDVP GLLATVSLCL
YRLGVDLVFA KIATQKDKAM DILHIREGGE KIPDSECESL ARTLRLLISS LYV