Gene Dbac_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3028 
Symbol 
ID8378723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3426207 
End bp3426530 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content53% 
IMG OID645002263 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_003159519 
Protein GI256830791 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAT CACCTTTGGC CATCAAGGCC TATTCCGCGG CAAGCGAGCT CTTGAGGAAC 
CCCAAGAGCC TTGACGCCAA AAACAACTCC ACCAAGGAAG CAACCCAGTC CTTCGCCGAG
ACCATCGAAG AGTCCCTGGC CAAGGTCAAC GATATGCAGG GCGAAAAATC GCTCATGATC
CAGGATTTTG TCTCGGGCAA AAACCAGAAT GTGCATGAGC TCATGATCAC CCTGCAAAAA
GCCGGACTGG CCATGGATAT GACCTCCGCT GTCCGCAACA AGGTCATGCA GGCATACCAG
GAAATAATGC GCATCCAGTT CTGA
 
Protein sequence
MAVSPLAIKA YSAASELLRN PKSLDAKNNS TKEATQSFAE TIEESLAKVN DMQGEKSLMI 
QDFVSGKNQN VHELMITLQK AGLAMDMTSA VRNKVMQAYQ EIMRIQF