Gene Dbac_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3025 
Symbol 
ID8378720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3424493 
End bp3425050 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content57% 
IMG OID645002260 
ProductTPR repeat-containing protein 
Protein accessionYP_003159516 
Protein GI256830788 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGC ATCTGGATTA TGAAATCAAC AAGGAACTTG GCGAATGTTA TCTTTTCATG 
GGTGAGCTGG ACAAGGCCGA GAGCTATTAC CATAAAGCCG CAAGCAGCAA CGGCGTCCAC
CCTGATCCAT ACCTGGGCCT TGCGACCATC GCAGTGCAGC GTGGGGACCT GGACCAGGCC
ATGGCCATGT ATCAGAAGGC CGAGAATATC GCCTCTTCGG ACAAGTCCAT AGCGGGAATA
GCCCTGGTCA GCGCCCATCA GGGCCAGGAA GGCAAGGCTT TTGATCTGTA TCTGAAAGCC
CTTTCCCTCA ATCCTGAAAA CATCGTCGCG CTTTTCGGGC TGGTTCAGGT CGCGCACGTG
CTTGGACGCA CGGCCGAGGC CATCACCCCC CTGGAACAGC ATCTGGAGTT AAACCCCGGC
AAAAGCGAAG TCCGCTATGC CTTGAGCGGA TGCCTTGTGT CGTGTGGCCG CAAAGACGAG
GCCAGGGCGC ATCTGCATCG GCTTTTGGAG ATGGACCCCG CCAACGCGTC GGCGGCCGAA
CTTCTGGCTC AGCTTTAG
 
Protein sequence
MSSHLDYEIN KELGECYLFM GELDKAESYY HKAASSNGVH PDPYLGLATI AVQRGDLDQA 
MAMYQKAENI ASSDKSIAGI ALVSAHQGQE GKAFDLYLKA LSLNPENIVA LFGLVQVAHV
LGRTAEAITP LEQHLELNPG KSEVRYALSG CLVSCGRKDE ARAHLHRLLE MDPANASAAE
LLAQL