Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3025 |
Symbol | |
ID | 8378720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3424493 |
End bp | 3425050 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645002260 |
Product | TPR repeat-containing protein |
Protein accession | YP_003159516 |
Protein GI | 256830788 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCGC ATCTGGATTA TGAAATCAAC AAGGAACTTG GCGAATGTTA TCTTTTCATG GGTGAGCTGG ACAAGGCCGA GAGCTATTAC CATAAAGCCG CAAGCAGCAA CGGCGTCCAC CCTGATCCAT ACCTGGGCCT TGCGACCATC GCAGTGCAGC GTGGGGACCT GGACCAGGCC ATGGCCATGT ATCAGAAGGC CGAGAATATC GCCTCTTCGG ACAAGTCCAT AGCGGGAATA GCCCTGGTCA GCGCCCATCA GGGCCAGGAA GGCAAGGCTT TTGATCTGTA TCTGAAAGCC CTTTCCCTCA ATCCTGAAAA CATCGTCGCG CTTTTCGGGC TGGTTCAGGT CGCGCACGTG CTTGGACGCA CGGCCGAGGC CATCACCCCC CTGGAACAGC ATCTGGAGTT AAACCCCGGC AAAAGCGAAG TCCGCTATGC CTTGAGCGGA TGCCTTGTGT CGTGTGGCCG CAAAGACGAG GCCAGGGCGC ATCTGCATCG GCTTTTGGAG ATGGACCCCG CCAACGCGTC GGCGGCCGAA CTTCTGGCTC AGCTTTAG
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Protein sequence | MSSHLDYEIN KELGECYLFM GELDKAESYY HKAASSNGVH PDPYLGLATI AVQRGDLDQA MAMYQKAENI ASSDKSIAGI ALVSAHQGQE GKAFDLYLKA LSLNPENIVA LFGLVQVAHV LGRTAEAITP LEQHLELNPG KSEVRYALSG CLVSCGRKDE ARAHLHRLLE MDPANASAAE LLAQL
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