Gene Dbac_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3017 
Symbol 
ID8378712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3414116 
End bp3415351 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content64% 
IMG OID645002252 
Productphosphoserine phosphatase SerB 
Protein accessionYP_003159508 
Protein GI256830780 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAA TTATTCTCAT CCAAATCGCC GGCATGGACC GGGACGGCCT GCTGGCCGGA 
ATCATGGGGC AACTGGCCCA GTCCGGGGTG ACCATCCTCG ATATCAGCCA GTCCGTCATT
CACGACGACC TCTCCCTTGG CGTCCTCATC GAGGTGCCGC AGGAGAATGA ATCCTCGCCC
ATCTTGAAAG ACCTTCTTTT CTGGGCCCAC AACCAGGGCC TGCACCTCAA GTTTTCACCC
GTGACCGAGG ACGATTACGA ACGCTGGGTC GGCGTGCAGG GCCGCAAGCG GCACATCGTG
ACCGTGCTCG GGCGGACGAT AACGGCGGAA AATCTGGCGG CCATGGCCGC GGTGATCACG
TCCCACGGCC TGAGCATCGA CTGCATCACC CGTCTCTCGG GCCGCAGGTC CCTGGCCAAT
CCGCCGGCCA TGCCCCGGTC ATGCCTGGAG TTTTCCGTGC GCGGCACCCC GGAGGACATT
TCCGGCATGC GCGCCGCTTT TCTGGACCTG TCCCGGGAAC AGGGCATCGA CATCGGCTTC
CAGGAAGACA ACGCCTTTCG ACGTATTCGC CGGCTGGTCT GTTTCGATAT GGACTCGACC
CTGATCCAGG CCGAGGTCAT CGACGAGTTG GCCAAACGGG CCGGGGTGGG AGAGGAGGTC
GCGGCCATCA CCGAGGCGGC CATGCGCGGG GAGCTGGATT TCTCCCAGAG CCTGCGCAAG
CGCGTCAGCC TGCTCAAGGG TCTGCCCGAA ACAGTGCTGC AGGATGTCGC GGCGACCCTG
CCCATGACCG AGGGCGCGGA GAGACTGATC CGCACCTTGA AGAGCCTGGG GTACACCATC
GCCATCCTGT CCGGGGGGTT CAATTATTTC GGGCGCCGCC TGCAGGAGCA TCTTGGCATC
GACTACGTGC ATGCCAATGA GCTTGAGATA AAGGACGGGG TCTTGACCGG CGGTCTGGTG
GGCGAGATCG TCGACGGCGC GGGCAAGGCC AGGCTGCTGA AAGCCATCGC CGCCGAAGAG
CACATTTCCC TGTCGCAGGT CATCGCCGTG GGCGACGGGG CCAACGATCT GCCCATGCTC
GACGTGGCGG GCCTCGGCAT CGCCTTTCAC GCCAAGCCTG TGGTCCGTCA GGGCGCGGGA
CAGGCCATCT CCAACGTGGG GCTTGACGGC GTGCTCTATT TTCTGGGCCT GCGGGACCGC
GAAACCGTGG ATCAACTGGC CGGACCGGAG GAATAA
 
Protein sequence
MREIILIQIA GMDRDGLLAG IMGQLAQSGV TILDISQSVI HDDLSLGVLI EVPQENESSP 
ILKDLLFWAH NQGLHLKFSP VTEDDYERWV GVQGRKRHIV TVLGRTITAE NLAAMAAVIT
SHGLSIDCIT RLSGRRSLAN PPAMPRSCLE FSVRGTPEDI SGMRAAFLDL SREQGIDIGF
QEDNAFRRIR RLVCFDMDST LIQAEVIDEL AKRAGVGEEV AAITEAAMRG ELDFSQSLRK
RVSLLKGLPE TVLQDVAATL PMTEGAERLI RTLKSLGYTI AILSGGFNYF GRRLQEHLGI
DYVHANELEI KDGVLTGGLV GEIVDGAGKA RLLKAIAAEE HISLSQVIAV GDGANDLPML
DVAGLGIAFH AKPVVRQGAG QAISNVGLDG VLYFLGLRDR ETVDQLAGPE E