| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3015 |
|---|
| Symbol | |
|---|
| ID | 8378710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3411788 |
|---|
| End bp | 3413620 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645002250 |
|---|
| Product | Carboxylyase-related protein |
|---|
| Protein accession | YP_003159506 |
|---|
| Protein GI | 256830778 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTACC GCAATCTCAA GTCCTGTCTC GACGATCTGG AGCGGACCAG ACAGCTGGTG
CGCATTGACG AACTCATCGA CCCCTGCATA GAGGCCGGCG CCATCCAGCG CAGGGTTTTC
CAGGCCGGGG GCCCGGCGCT GCTCTTCACC AACGTCAAGG ACACGAAGTT TCCCATGGCC
GCCAATATTT TCGGGACATT GGCGCGCACC AAGTTCATTT TTCGCTCCAC CCTGCACCGC
GTGGAGGCCA TGCTTTCGGC CAAGGCCGAC CCGGCTCTTG TTCTGAAAAA GCCCGCGCTC
TGGCCCGGTC TGGCGCTGGG TGCCTGGCAC ACCCTGCCCA AGACCGTGAG CGGCGGCCCG
ATCCTGGACC ACACCACCAG CATTTCAGAG CTCCCGCAGC TCATTTCCTG GCCCATGGAC
GGCGGCGCCT ATGTGACCCT GCCGCTGGTT TATTCCGAGA GCCCGTCCAA GCCTGGGTAC
ATGGGTTCGA ATCTGGGCAT GTATCGCATC CAGCTCTCGG GCAACGAGTT TGAAAGGGAC
CGGGAAGTGG GGCTGCACTA TCAGATCCAC CGCGGCATCG GCTACCATCA TGCCGAGGCC
ATCGCGCGCA AAACGCAGCT GCCTGTGAAC GTTTTCGTGG GCGGACCTCC GGCCATGACG
CTGGCCGCCA TCATGCCCCT GCCCGAAGGC ATCGCCGAGA TGCTCTTTGC CGGCGCGCTG
GGCGGGCATC GCGTGCCCAT GGTCAAGCGG CCCGGGGAGC TGCCGATGCC GGCCGAGGCG
GATTTCTGCA TCCGGGGCTA CATCGACCCC GCCGTGCAGA AGCCCGAAGG TCCCTTCGGG
GACCATCTCG GCTATTACAG CCTGGCGCAT GATTTCCCGG TCATGCGGGT CACCGAGGTA
CTGCACCGCG CAGGCGCCAT CTGGCCCTTC ACCACGGTGG GCAGGCCTCC GCAGGAGGAC
ACCATGTTCG GGGCCTTCAT CCACGAGCTC ACTGCCGAGC TTGTGCCGCA GGTTTTCGGC
GGCGTGCACG AGGTTCACGC CGTGGATGCG GCCGGGGTGC ACCCGCTTCT TCTGGCCGTG
GGCAGCGAAC GCTACGTGCC GTACGCGGGC GAACGCCAGC CGCAGGAACT GATCACCAAC
GGCCTTTCGC TTCTGGGCAC GACTCAGACA TCCCTTTCCA AGTACGTTAT CCTCGCCGCC
CGCGAAGACG ATCCGGGCCT GTCCTGTCAC GACGTACCCA GATTTTTCCG GCACGTGCTT
GAGCGCCTGG ACCTGTCGCG AGACCTGCAC TTCATCACCC GCACGACCAT GGACACGCTT
GATTATTCGG GCATCAGCCT CAACCAGGGC TCCAAGGTGC TGTGGACGGC GGCCGGGAAC
CCCAAGCGCA CCCTGGCCAC GACCCTGCAG GGCCTGACCC TGCCGGACGG TTTTTCGAAT
CCGCGTTTTT TTGCCCCCGG CATGCTGGTT TTGTCCGGTC CGCCCCATGC GCAACCACGC
GACACCTTTG ATCCCGCCAT GGAAAATCTG TGTCAGATCC TGGCGAGGGC GGACCTGCAA
GGTTTCCCGC TGATTGTCGT CGCGGACGAC GCCGATTTCA CGGCGGAGTC CTGGGATAAT
TTCCTGTGGG TGACCTTCAC CCGCTCGGAC CCGGCCACGG ACACCTACGG GCTGAACGGA
TTCACGCATT GCAAGCACTG GGGGTGCACG AGCATGGTCG TCGATGCCCG GCTCAAGACC
TATCACGCTC CGGCGCTGTC CAGTGTGGCG GAAATCGAAA AAAAGGTGGA CGAGCTTGCC
CTGCCGGGAA GACCCCTGTA TGGAATCATT TAA
|
|---|
| Protein sequence | MIYRNLKSCL DDLERTRQLV RIDELIDPCI EAGAIQRRVF QAGGPALLFT NVKDTKFPMA
ANIFGTLART KFIFRSTLHR VEAMLSAKAD PALVLKKPAL WPGLALGAWH TLPKTVSGGP
ILDHTTSISE LPQLISWPMD GGAYVTLPLV YSESPSKPGY MGSNLGMYRI QLSGNEFERD
REVGLHYQIH RGIGYHHAEA IARKTQLPVN VFVGGPPAMT LAAIMPLPEG IAEMLFAGAL
GGHRVPMVKR PGELPMPAEA DFCIRGYIDP AVQKPEGPFG DHLGYYSLAH DFPVMRVTEV
LHRAGAIWPF TTVGRPPQED TMFGAFIHEL TAELVPQVFG GVHEVHAVDA AGVHPLLLAV
GSERYVPYAG ERQPQELITN GLSLLGTTQT SLSKYVILAA REDDPGLSCH DVPRFFRHVL
ERLDLSRDLH FITRTTMDTL DYSGISLNQG SKVLWTAAGN PKRTLATTLQ GLTLPDGFSN
PRFFAPGMLV LSGPPHAQPR DTFDPAMENL CQILARADLQ GFPLIVVADD ADFTAESWDN
FLWVTFTRSD PATDTYGLNG FTHCKHWGCT SMVVDARLKT YHAPALSSVA EIEKKVDELA
LPGRPLYGII
|
|---|
| |