Gene Dbac_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3008 
Symbol 
ID8378703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3400866 
End bp3402176 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content62% 
IMG OID645002243 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003159499 
Protein GI256830771 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTT TCGAAGATAT CGCATCCGGC GTCTCAGAAG TTGCCGTGGT GGGCCTTGGC 
TATGTCGGCC TGCCCTTGGC CGTGGCCCTT GGCGACCACT TCAAGGTCAT CGGTTTTGAT
ATTTCCCGGC CCCGCATCGA AGAACTGCGC GAAGGCAAGG ATTCCACGCG CGAGGTAGCC
CCTGAAAGGC TGGCCGGCGC CCGGGTCGAG TACACCGACG ATCCCGCACG GCTTGCCGGG
GCCGGAGTCA TCGTGGTGGC CGTGCCGACG CCCATCGACG GCAATCGCAA GCCGGACCTG
CGGCCCGTGG TCGGCGCCAC CGCCACTGTC GGCGCGCACA TGCGGGCAGG CTGCATCGTC
GTTTATGAGT CGACGGTCTA CCCAGGGCTG ACGGAAGAAA TCTGCGTACC GCTGCTGGAA
GAAAAATCCG GCCTGACCTG CGGCAGGGAT TTCACGGTGG GCTATTCCCC GGAGCGCATC
AACCCCGGCG ACAAGGTCCA CACCCTGGAG AGCATCGTCA AAGTGGTCGC AGGCCAGGAT
CAGACCACGG CAGACCTGCT CGCCCGTTTC TATGCCTCCA TCGTCAGGGC CGGCGTGCAC
CGCGCTTCGA GCATCAAGGT CGCGGAGGCC GCCAAGGTCA TCGAGAACAC CCAGCGCGAT
CTGAACATCG CCCTCATGAA CGAACTGGCG CTCATTTTCG ACCGCATGGG CATCGACACG
AACGAAGTGC TTGAGGCCGC CGGCACCAAA TGGAATTTCC TGCCCTTCCG GCCGGGTCTG
GTCGGCGGGC ACTGCATCGG AGTGGACCCG TACTACCTGA CCTTCAAGGC CGAATCCATC
GGCTTCCATC CGCAGGTCAT CCTCGCCGGC AGACGCATCA ACGACGGCAT GGGCAAATTC
ATCGCGGAGA AGACCATCAA AGCCATGATC GACGCAGGAT GCCTGATCAA AGGCGCCCGC
GTCGGACTGC TCGGCCTGAC CTTCAAGGAA GATGTGCCGG ATTTGCGCAA CAGCCGGGTG
GAAGACATCA TCCACGAACT TTCCGACTAC CACGTCGATG TCCTGGTTCA CGATCCTCTG
GCCGACGCGG CGGAGGCCAA AGAGGAATAC GGGGTGGATC TTTTGCCCTT GCCGGAACTT
AATCAGCTCG ACGCCCTCAT CCTGGCGGTG TCGCATGCCG AATTCGCGCA CCTTGACGCT
GGCCGGATCG CGACCATGTT CAAAAACCCG GAAAATGGGA TCGTCATTGA TGTCAAGGGG
TTTCTGGACC GGGACGCCTT GTCGCGGAAC TTCAGATACT GGCGGCTCTA A
 
Protein sequence
MITFEDIASG VSEVAVVGLG YVGLPLAVAL GDHFKVIGFD ISRPRIEELR EGKDSTREVA 
PERLAGARVE YTDDPARLAG AGVIVVAVPT PIDGNRKPDL RPVVGATATV GAHMRAGCIV
VYESTVYPGL TEEICVPLLE EKSGLTCGRD FTVGYSPERI NPGDKVHTLE SIVKVVAGQD
QTTADLLARF YASIVRAGVH RASSIKVAEA AKVIENTQRD LNIALMNELA LIFDRMGIDT
NEVLEAAGTK WNFLPFRPGL VGGHCIGVDP YYLTFKAESI GFHPQVILAG RRINDGMGKF
IAEKTIKAMI DAGCLIKGAR VGLLGLTFKE DVPDLRNSRV EDIIHELSDY HVDVLVHDPL
ADAAEAKEEY GVDLLPLPEL NQLDALILAV SHAEFAHLDA GRIATMFKNP ENGIVIDVKG
FLDRDALSRN FRYWRL