Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2997 |
Symbol | |
ID | 8378691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3390051 |
End bp | 3391985 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645002231 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_003159488 |
Protein GI | 256830760 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCAGA TACAAGGGCA AGACGTCGAG GTTCAGGCTG GTCAGACATG CGCGGATGTG TTGCGCGCTG TCCTCTCCGG CAAGAAGATG AAGTCCGCGG TGGCCTGCGT TTGCGACGGG GCGCTGCTCG ATTTGGCTCG CCCGGTGCCC GCCGGAACCG CCGTCATGGA GCCCGTGTTT CTGGAATCGG CCGAGGGGCT GAGCGTGCTG CGCCACAGCG CCGCCCACGT CATGGCTGAA GCGGTCAAGG AACTGTTCCC CTCCGCCAAG GTGACCATCG GTCCCGATGT CGAGAGCGGC TTTTATTACG ATTTCGATTT CGAGCGTCCG TTCACTCCCG AAGATCTGGA AAAGATCGAG GCGCGCATGA CGGCGTCCGT GGTCGCGAAC CAGCCTTTTT CCCGCGAGGA AATGAGCGCT GTCGAGGCGA GGGCGCTTTT TGCCTCCATG GGCGAAACAT ACAAGCTTGA AATCATAGAT GACCTTGGCG CCGATCAGGT CTCTCTCTAT CGTCACGGCA ATTTCGTGGA CCTCTGCCGC GGTCCGCACC TGCCCTCGAC CGGGTTTCTG CAGGCCGTGA AGCTGACCTC CGTGGCCGGT GCCTACTGGC GCGGGGATTC GAAGCGTCCC ATGCTGCAGC GCATCTACGG CACCGCCTTC GCCACCCCCA AGGAATTAAA GGCCCACCTG GCCATGATCG AGGAAGCCAA GAAGCGCGAC CACCGCAAGC TCGGCCCCCA GCTCGACCTG TTCAGTTTCC ATGAACGCGG CGGCGCGGGC ATGGCCTACT GGCATCCCAA GGGCGGCCTG GTGCGGACTA TTCTCGAAGA TTTCGTGAAC AAGGAAATGA TCCGCCGCGG CTACGGCATC GTGCGCACCC CCCAGATTTT GAAGCGCGAC CTGTGGGAGA CCTCCGGCCA TTACGCCAAC TACCGTGAGA ACATGTATTT CACGGAGATC GACGAGGTGC CTTACGGGGT CAAGCCCATG AACTGCGTGG CGCACATGCT GATCTACAAC ACCAGCCAGC GTAGCTACCG CGACCTGCCT GTCCGCCTGT TCGAGTTCGG CGTCGTGCAT CGTCACGAGC TGTCCGGCGT GCTGCACGGG CTCATGCGCG TGCGCCAGTT CACCCAGGAC GACGCGCACA TCATCTGCCG TCCTGACCAG CTTCTGGACG AGATCAAGGG CGTCATGACC TGGATTCAGG ATCTCATGGG CGTCTTCGGC TTCGAATATT CCATGGAAAT CAGCACCCGG CCCGAGAAAT CCATCGGTTC CGACGCGGAC TGGGAGCGCG CCACGAGCGC CCTTATGGAC GCCATGGGCC AGATGGAGCT TCCGTATACG ATCAACGAGG GCGACGGCGC CTTCTACGGT CCCAAGATCG ACGTCAAGCT GCGCGACTGC CTGGGCAGGC AGTGGCAGTG TTCGACCATC CAGGTCGATT TCACCTTGCC GGATCGTTTT GACTTGTTAT ACGTGGGCGA AGATGGCGAG CGGCACCGTC CTGTCATGGT GCATCGCGCC ATCATGGGTT CGGTGGAGCG TTTCATCGGC ATTCTGACCG AACATTTCGC CGGAGCTTTT CCGGCATGGC TTGCGCCTGT CCAGGCCCGC ATATTGACAG TGACCGACAA CCACGACGAA TTCGCCCGCA AGTGCCAGGA CGCGTTGCAG CGGGAGGGAG TGCGCGTGGA ACTCGATCTG CGCAACGAGA AGCTGGGATA CAAGGTGCGT GAGGCGCAGA TGGAAAAAGT TCCGTATGCG CTGGTCATTG GGGATCAGGA AGTCGAGCAG GCCTGCGTCA ACGTGCGCAT GCTGGGTGGC AACAATCTGG GCGTCATGTC CGTCGATGCG TTTGCCGACC ACTTGCGGCA GGAATGCGAA AAACCATTTA AACATGGAGG AATGAGATAT TCTTTCAGCT GCTAA
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Protein sequence | MVQIQGQDVE VQAGQTCADV LRAVLSGKKM KSAVACVCDG ALLDLARPVP AGTAVMEPVF LESAEGLSVL RHSAAHVMAE AVKELFPSAK VTIGPDVESG FYYDFDFERP FTPEDLEKIE ARMTASVVAN QPFSREEMSA VEARALFASM GETYKLEIID DLGADQVSLY RHGNFVDLCR GPHLPSTGFL QAVKLTSVAG AYWRGDSKRP MLQRIYGTAF ATPKELKAHL AMIEEAKKRD HRKLGPQLDL FSFHERGGAG MAYWHPKGGL VRTILEDFVN KEMIRRGYGI VRTPQILKRD LWETSGHYAN YRENMYFTEI DEVPYGVKPM NCVAHMLIYN TSQRSYRDLP VRLFEFGVVH RHELSGVLHG LMRVRQFTQD DAHIICRPDQ LLDEIKGVMT WIQDLMGVFG FEYSMEISTR PEKSIGSDAD WERATSALMD AMGQMELPYT INEGDGAFYG PKIDVKLRDC LGRQWQCSTI QVDFTLPDRF DLLYVGEDGE RHRPVMVHRA IMGSVERFIG ILTEHFAGAF PAWLAPVQAR ILTVTDNHDE FARKCQDALQ REGVRVELDL RNEKLGYKVR EAQMEKVPYA LVIGDQEVEQ ACVNVRMLGG NNLGVMSVDA FADHLRQECE KPFKHGGMRY SFSC
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