| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2962 |
|---|
| Symbol | |
|---|
| ID | 8378655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3350207 |
|---|
| End bp | 3351289 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645002195 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003159453 |
|---|
| Protein GI | 256830725 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0300282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA GTGGACTCGA CAGCGCCGCC AAAAAGCGCC TGAGCACGTT GAAAGCCGGA
GAGCGCATCG ATCCGGAGTT CGCGCTGGAA ATTGCGCGCA ATGCCTCGGT GCACGAGCTG
GGCGAGGCGG CCCTCAAGCA GCGCCGCGCA CGGCACGGCG ACAAGGCCTA TTATGTCTAT
AACCAGCACC TGAACTACAC CAACGTGTGC CGCAACCAGT GCCGTTTCTG CGCTTTTTTC
AAGAAGGCCG GCGAGGAAGG CGGATACACC TATTCACTGG AAGAAGCCAG AAAGCGTCTC
ACGGACCGCA TCCACGAGCC CATCCGCGAG ATCCACATCA CCGGCGGCCT TAACCCGGAT
CTGCCCTATC AATACTACCT TGATCTCTTG GCCCTGTGCA AGGAAGTGCG GCCACAGGCC
GTGGTCAAGG CCTTCACCGC CGTGGAGGTG GCCCATTTCG CGGACACTCT GGGCACGGAC
GAGGCCACGG TGCTCCGCGA GATGAAGGCC GTGGGCCTGG ACGCGTTGCC CGGCGGCGGC
GCCGAGGTCT TTTCCCCGGC CATGCGTGAG CAGCTGTGCC CGGAAAAAGT CACCGCCGAT
CGTTGGCTGC ATATTCACGG GCTGGCGCAC GACATGGGTA TAAAAACCAA TTCCACCATG
CTTTTCGGGC ACATCGAGTC CTGGGAAGAC CGCATCTACC ACATGGAGCG CTTGCGCGCC
GCAGAGGACG AGAAGCCCGG ATTCATCGTC TTCATTCCCC TGGCCTACCA GCCGCGCAAC
AACGCCCTGA GCGCTGCCGG CCCCACGGGC GAGGATTATC TGCGCACCAT TTCCGTGTCG
CGTCTCTTCC TGGACAATAT CCCGCACATC AAGGCCTACT GGGCCTTTTC CGGGATCAAG
GCCGCGCAGA TGGCGCTGTG GGCCGGTGCA GACGATTTCG ACGGCACCAT CGTTGAGGAG
AAAATCGGGC ATGCGGCGGG CGCCGATTCG CCCAAGGGCA TGACCATCTC CGAACTGGTC
GAGACCATCG CCGCCACGGG ATTCACCCCG GTTGAGCGGG ATACGTTCTT TGCGGAACTG
TAG
|
|---|
| Protein sequence | MIESGLDSAA KKRLSTLKAG ERIDPEFALE IARNASVHEL GEAALKQRRA RHGDKAYYVY
NQHLNYTNVC RNQCRFCAFF KKAGEEGGYT YSLEEARKRL TDRIHEPIRE IHITGGLNPD
LPYQYYLDLL ALCKEVRPQA VVKAFTAVEV AHFADTLGTD EATVLREMKA VGLDALPGGG
AEVFSPAMRE QLCPEKVTAD RWLHIHGLAH DMGIKTNSTM LFGHIESWED RIYHMERLRA
AEDEKPGFIV FIPLAYQPRN NALSAAGPTG EDYLRTISVS RLFLDNIPHI KAYWAFSGIK
AAQMALWAGA DDFDGTIVEE KIGHAAGADS PKGMTISELV ETIAATGFTP VERDTFFAEL
|
|---|
| |