Gene Dbac_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2948 
Symbol 
ID8378641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3334287 
End bp3335387 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID645002181 
Productrhodanese-like domain/cysteine-rich domain- containing protein 
Protein accessionYP_003159439 
Protein GI256830711 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA CGCCCCTGCC GCCGCCACTG ACCGCCCTGG CCGAGCGCAT CTCCTCGGAA 
TGCACCGAGT GCAGGGCCTG TCAGACCCGC TGCGCATTCC TGCGGGAGCA CGGCACGCCC 
AAGCTCATGG CCGACCTATT GCTGGGCAAG GGCCAAGGCC GCGCCCTGGC CTTTGAGTGC 
AGCCTGTGCG GACTGTGCGA AACCTTCTGT CCCATGCATC TGCCGCTGTC GGATTTTTTT 
CTGTCCATGC GCAGGGCGGC GCTGGATGCC GGACGCGTCA GCCTGAGTCC GTATCGCGCG 
CTGCTGAATT ACGAAGCGCT GGGCGCATCC CGGCTCTTTC GGGCCTTCAG GCTGCCTCCC 
GGAGGGGATA CGGTCTTTTT CCCCGGCTGC ACTTTTCCAG GAACCAGCCC GGCCACGGCG 
ATAGCGCTGT TCCTGCACCT GCAAAAATGC GTGCCGGGTC TGGGCCTGGC CCTGGACTGC 
TGTTTCAAGC CGTCCCACGA CCTGGGCCGC CAGGATTTTT TTGAACAGCA TTTCGGGGAG 
CTGCGCACGC GCTTTCTGGC GCGCGGAGTA CGCACGGTGC TGGCCGCCTG TCCCAACTGC 
TTCAAGATGT TCAGCCAGTA TGGCGACGGC CTTGCCGTGA AAACCGTGTA CGAGGCGATG 
GCGGAATATC CGCTCCCCGC GAGGCCGCAC GCGCGCGGCC CGGCCATAGT GCATACGCCC 
TGCCCTTTTC GCGGCCAGAC AAGTCTTCAG GAAATCATTT TGGGATGTGC CCAGGGATCG 
GGCCTGGATG TGGAAAAAAC ACGGCATGAC GGGTCGCAGA GCCCGTGCTG CGGAGAAGGA 
GGGGCCGTGG GCGACCTGAA GCCGGAAAAC TCCTCAACCT GGGCCATGGG CACCGCTGAA 
CACGCCCAAG GCCGGATTGT CATCACCACC TGCGCAGGCT GCGTCAAAGC CCTCTCGCCC 
CACGCCCGTG CGGTGCATCT GCTGGACCTG CTCTTTTTTC CCGCTGAAAC ACTCAGCAAT 
GCGTTACCAC GGCCTCGAGG TACGGCCGTC TATCTTCACC GCCTTCTTTT CAAATGGCGG 
GCGCGGCGAA TCCTGGACTG A
 
Protein sequence
MKSTPLPPPL TALAERISSE CTECRACQTR CAFLREHGTP KLMADLLLGK GQGRALAFEC 
SLCGLCETFC PMHLPLSDFF LSMRRAALDA GRVSLSPYRA LLNYEALGAS RLFRAFRLPP 
GGDTVFFPGC TFPGTSPATA IALFLHLQKC VPGLGLALDC CFKPSHDLGR QDFFEQHFGE 
LRTRFLARGV RTVLAACPNC FKMFSQYGDG LAVKTVYEAM AEYPLPARPH ARGPAIVHTP 
CPFRGQTSLQ EIILGCAQGS GLDVEKTRHD GSQSPCCGEG GAVGDLKPEN SSTWAMGTAE 
HAQGRIVITT CAGCVKALSP HARAVHLLDL LFFPAETLSN ALPRPRGTAV YLHRLLFKWR 
ARRILD