Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2943 |
Symbol | |
ID | 8378636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3329725 |
End bp | 3331485 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645002176 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003159434 |
Protein GI | 256830706 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGT ACGCAGACAG AATGAAGCGG ACACGGGTAA ATCCGTGGCT GGTGGCGGGG ATGACGGTCA TTCTTGGACT GGCGGTGTCG TTTTTCGCGG TGCGCAACGT CCAGCGCGAG AGGGAGCACA TGGTCCGGGG CTATCTGGAG CATGCCGAGT CCCTGTTCTG GGCGCTGGAG GCGGGAACCC GCATAGGGAT GGGCATGCAC GGCAGCGCAG GCTATTTTCA GTCTCTGGTG GAGGAGACGG CCAAACAGCA CGGCATCGTC TATCTGGCCG TGACCGATGC CAAGGGACTC GTCCTGGCCC ACAGCGACGC GGCCCGGATC GGGTCGGTTC TTCATCCCCC GGAAGCCATG TCCGCCCGGA CCCTGAGCGA AGAGCGGCAG GGGCATTTTC AGGAGGTGGA AGGCGGTCGG GTTTTCGAGG TCTATAAAAA ATTTGCGCCC CTGCCGGGGG TTCATCACTC CATGTGGTGC CCGCCCCGCA ACGGGGGAAT GGGCGCGATG GGCATGATGC GGCCCCCGGC CCAAGGCGAG GGCGATCATG ATCCGTCCGT CATCTTTGTC GGCCTGGATG TGCGCCCCCT GGAGGAGGCC GTGGCCGGCG AGCTCCGCAC TAACGTGGTG ATAACTGTGC TCGTGCTGTT CATGGGTCTG GGCGGTTTCG CTTCGCTTTT CTGGGCCCAG CATTACCGCC TCTCCCGGCG TCAGTTGCGG GACACCCAGG CCTTCGCTTC TGAGGTGGTG AGGTGCCTGC CCCTGGGTCT GCTCAGCACC GATCCCGATG GGCGGGTGGT CCTGTCCAAC GGCGGGGCGT CGGCCCTCTT TGGGCTGGAC AGGGACGCCA TGTCGGGCAT GCTTCTGGAT GGTCTCGGAG GCTTGGATTG GGGCGGGATC ATGGCCGAGC TGGCAGACAA GGGCACGGTG CCGGAGCGAG AAGTGACCCT TGTCGCGGGA CCGGGCAAAC GGGTCCCGGT CAATCTGGGC GCGTCCCGTA TCGTCACCAG CGATGACGAC TTCGTGGGCT ATCTCTTCTT GCTGCGCGAT CTGGGCGAAA TTCGACGCCT GCAGGAGCAG GTCCGGCGCA ACGAGCGCCT GACGGCCCTG GGCAATCTGG CCGCCGGGGT GGCCCACGAG ATCAGAAATC CGCTCAGCTC CATCAAGGGC TTTGCCACCT ATCTTGCCGG CAAGGTTCAG GGGCAGGACC AGGACGCGGC GCGGGCCATG ATCCAGGAAA CGGACCGCCT GAACCGCGTG GTTTCGGAGC TGCTGGAGTT CGCCCGGCCC GGAGAGATGA AGCTGCGCGA CGAGGATCTG GCGCAGGTCG TGGAGCGGGC CCTGCGTCTG GTCCGCGCCG ACGTGACGGC CAAGAACGTT GCGGTGCATT TTGAGCAGGC GGGGACCTTG CCCCGCGTCC CGCTGGACCC CGAGCGTTTT ACCCAGGCGC TCCTCAACCT GTTCCTCAAT GCCGTGCAGG CCATGGACCA GGGCGGGACG CTGCGGATCA CGGCGGCCCA GGAGCCGGAT GCCGGAGGCG TGGCCCTGCG CATCGCGGAC ACGGGCCATG GCATGGCGGC GGAGCTTGTG CCGGACATTT TCAATCCCTA TTTCACGACC AAAAGTTCGG GCACGGGTCT GGGCCTGGCC ATCGTGCACC GCATCATCGA AGCCCACGGC GGCGAAATCA AGGTGGAAAG CGTCGTGGGC CAGGGCACGG TTTTCACCCT CATGCTGCCC ACGACCGGGA GGCGGTCATG A
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Protein sequence | MNMYADRMKR TRVNPWLVAG MTVILGLAVS FFAVRNVQRE REHMVRGYLE HAESLFWALE AGTRIGMGMH GSAGYFQSLV EETAKQHGIV YLAVTDAKGL VLAHSDAARI GSVLHPPEAM SARTLSEERQ GHFQEVEGGR VFEVYKKFAP LPGVHHSMWC PPRNGGMGAM GMMRPPAQGE GDHDPSVIFV GLDVRPLEEA VAGELRTNVV ITVLVLFMGL GGFASLFWAQ HYRLSRRQLR DTQAFASEVV RCLPLGLLST DPDGRVVLSN GGASALFGLD RDAMSGMLLD GLGGLDWGGI MAELADKGTV PEREVTLVAG PGKRVPVNLG ASRIVTSDDD FVGYLFLLRD LGEIRRLQEQ VRRNERLTAL GNLAAGVAHE IRNPLSSIKG FATYLAGKVQ GQDQDAARAM IQETDRLNRV VSELLEFARP GEMKLRDEDL AQVVERALRL VRADVTAKNV AVHFEQAGTL PRVPLDPERF TQALLNLFLN AVQAMDQGGT LRITAAQEPD AGGVALRIAD TGHGMAAELV PDIFNPYFTT KSSGTGLGLA IVHRIIEAHG GEIKVESVVG QGTVFTLMLP TTGRRS
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