Gene Dbac_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2943 
Symbol 
ID8378636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3329725 
End bp3331485 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content65% 
IMG OID645002176 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003159434 
Protein GI256830706 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGT ACGCAGACAG AATGAAGCGG ACACGGGTAA ATCCGTGGCT GGTGGCGGGG 
ATGACGGTCA TTCTTGGACT GGCGGTGTCG TTTTTCGCGG TGCGCAACGT CCAGCGCGAG
AGGGAGCACA TGGTCCGGGG CTATCTGGAG CATGCCGAGT CCCTGTTCTG GGCGCTGGAG
GCGGGAACCC GCATAGGGAT GGGCATGCAC GGCAGCGCAG GCTATTTTCA GTCTCTGGTG
GAGGAGACGG CCAAACAGCA CGGCATCGTC TATCTGGCCG TGACCGATGC CAAGGGACTC
GTCCTGGCCC ACAGCGACGC GGCCCGGATC GGGTCGGTTC TTCATCCCCC GGAAGCCATG
TCCGCCCGGA CCCTGAGCGA AGAGCGGCAG GGGCATTTTC AGGAGGTGGA AGGCGGTCGG
GTTTTCGAGG TCTATAAAAA ATTTGCGCCC CTGCCGGGGG TTCATCACTC CATGTGGTGC
CCGCCCCGCA ACGGGGGAAT GGGCGCGATG GGCATGATGC GGCCCCCGGC CCAAGGCGAG
GGCGATCATG ATCCGTCCGT CATCTTTGTC GGCCTGGATG TGCGCCCCCT GGAGGAGGCC
GTGGCCGGCG AGCTCCGCAC TAACGTGGTG ATAACTGTGC TCGTGCTGTT CATGGGTCTG
GGCGGTTTCG CTTCGCTTTT CTGGGCCCAG CATTACCGCC TCTCCCGGCG TCAGTTGCGG
GACACCCAGG CCTTCGCTTC TGAGGTGGTG AGGTGCCTGC CCCTGGGTCT GCTCAGCACC
GATCCCGATG GGCGGGTGGT CCTGTCCAAC GGCGGGGCGT CGGCCCTCTT TGGGCTGGAC
AGGGACGCCA TGTCGGGCAT GCTTCTGGAT GGTCTCGGAG GCTTGGATTG GGGCGGGATC
ATGGCCGAGC TGGCAGACAA GGGCACGGTG CCGGAGCGAG AAGTGACCCT TGTCGCGGGA
CCGGGCAAAC GGGTCCCGGT CAATCTGGGC GCGTCCCGTA TCGTCACCAG CGATGACGAC
TTCGTGGGCT ATCTCTTCTT GCTGCGCGAT CTGGGCGAAA TTCGACGCCT GCAGGAGCAG
GTCCGGCGCA ACGAGCGCCT GACGGCCCTG GGCAATCTGG CCGCCGGGGT GGCCCACGAG
ATCAGAAATC CGCTCAGCTC CATCAAGGGC TTTGCCACCT ATCTTGCCGG CAAGGTTCAG
GGGCAGGACC AGGACGCGGC GCGGGCCATG ATCCAGGAAA CGGACCGCCT GAACCGCGTG
GTTTCGGAGC TGCTGGAGTT CGCCCGGCCC GGAGAGATGA AGCTGCGCGA CGAGGATCTG
GCGCAGGTCG TGGAGCGGGC CCTGCGTCTG GTCCGCGCCG ACGTGACGGC CAAGAACGTT
GCGGTGCATT TTGAGCAGGC GGGGACCTTG CCCCGCGTCC CGCTGGACCC CGAGCGTTTT
ACCCAGGCGC TCCTCAACCT GTTCCTCAAT GCCGTGCAGG CCATGGACCA GGGCGGGACG
CTGCGGATCA CGGCGGCCCA GGAGCCGGAT GCCGGAGGCG TGGCCCTGCG CATCGCGGAC
ACGGGCCATG GCATGGCGGC GGAGCTTGTG CCGGACATTT TCAATCCCTA TTTCACGACC
AAAAGTTCGG GCACGGGTCT GGGCCTGGCC ATCGTGCACC GCATCATCGA AGCCCACGGC
GGCGAAATCA AGGTGGAAAG CGTCGTGGGC CAGGGCACGG TTTTCACCCT CATGCTGCCC
ACGACCGGGA GGCGGTCATG A
 
Protein sequence
MNMYADRMKR TRVNPWLVAG MTVILGLAVS FFAVRNVQRE REHMVRGYLE HAESLFWALE 
AGTRIGMGMH GSAGYFQSLV EETAKQHGIV YLAVTDAKGL VLAHSDAARI GSVLHPPEAM
SARTLSEERQ GHFQEVEGGR VFEVYKKFAP LPGVHHSMWC PPRNGGMGAM GMMRPPAQGE
GDHDPSVIFV GLDVRPLEEA VAGELRTNVV ITVLVLFMGL GGFASLFWAQ HYRLSRRQLR
DTQAFASEVV RCLPLGLLST DPDGRVVLSN GGASALFGLD RDAMSGMLLD GLGGLDWGGI
MAELADKGTV PEREVTLVAG PGKRVPVNLG ASRIVTSDDD FVGYLFLLRD LGEIRRLQEQ
VRRNERLTAL GNLAAGVAHE IRNPLSSIKG FATYLAGKVQ GQDQDAARAM IQETDRLNRV
VSELLEFARP GEMKLRDEDL AQVVERALRL VRADVTAKNV AVHFEQAGTL PRVPLDPERF
TQALLNLFLN AVQAMDQGGT LRITAAQEPD AGGVALRIAD TGHGMAAELV PDIFNPYFTT
KSSGTGLGLA IVHRIIEAHG GEIKVESVVG QGTVFTLMLP TTGRRS