Gene Dbac_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2897 
Symbol 
ID8378590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3279654 
End bp3280697 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content66% 
IMG OID645002130 
ProducttRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase 
Protein accessionYP_003159388 
Protein GI256830660 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAA CTGCGATCGC ACTGAGCGGA GGGGCCGATT CCCTCATGAG CCTGCTTCTG 
CTCCGGGAAA CCGGGGCCGA GGTCATGGCC GTACACGCCC GTTTTCTGGG CGCCGACGAC 
GAGGCCCTGC ACGAACGCCT GCACGGCCTT TGCGCGAAAC TTCGTGTGCC CTTCCATCTG 
GTGGACCTGC GGCGCGAATT CGAGGAACTG GTCATTGCCC CCTTTGTGCG CGCCTATCAG 
TCCGGACTGA CCCCCAATCC GTGCGCGACC TGCAATCCAG CCATAAAATT CGGCCTGCTG 
CTGGACAGGG TCCGGGAGCT CGGGGCGGAC CGGCTGGCCA CGGGCCATTA TGCCCGCCTC 
GCGCGTACTC CGCACGGTGC CGCCCTGTAC AGAGGGCTCG ATGCGGACAA GGATCAGAGT 
TATTTTTTGT CCAGAGTTCC CCGGGAAAGG TTTGAGCAGG TCATTTTCCC CCTGGCCGAC 
TGGACCAAGA GCGCCGTTCG CCAGGCCCTG GCCGAACGCG GGCTCACGCC TCCCGCCGGG 
CGGGAAAGCC AGGAGGTTTG CTTCATCCCC TCCGATTACA GGGACTTTCT GCGGGAGCGC 
AACGTCCGCC TGGGCGGCCC CGGCCCGATC ACGCTGGCCG ACGGCACGGT CCTGGGACGT 
CACGCGGGGC TGTGGAACCA TACCCTGGGT CAACGCAAGG GCCTCGGCAT CGCCTACAGT 
CAGCCCCTTT ACGTCACGGG CAAGGATTTC GTGCAGAACC GGCTCCTCGT CGGCCCCAAA 
TCCGAGACCC TCTCGTCCGG CTGCCGCACG GGCATCCCCA ACCTGCTCTG GCCGCCCGAA 
CTCTGGCCCG GGGAGATCCT CGCGCAGACG ATCTACCGCC AACGCCCCGA ACCTGCGCGC 
GTGAGCGTGG ACCAAACCGG CATGACCATC ACCTTTCCCG AGCCACGGCC CATGCCCACC 
CCCGGGCAGG TGGCCGCGGT GTATTCCGCC GAGGGGCAGG TCCTGGCCGG CGCGGTCATC 
GAGGAGGCCA GCCATGCGGC GTGA
 
Protein sequence
MHKTAIALSG GADSLMSLLL LRETGAEVMA VHARFLGADD EALHERLHGL CAKLRVPFHL 
VDLRREFEEL VIAPFVRAYQ SGLTPNPCAT CNPAIKFGLL LDRVRELGAD RLATGHYARL 
ARTPHGAALY RGLDADKDQS YFLSRVPRER FEQVIFPLAD WTKSAVRQAL AERGLTPPAG 
RESQEVCFIP SDYRDFLRER NVRLGGPGPI TLADGTVLGR HAGLWNHTLG QRKGLGIAYS 
QPLYVTGKDF VQNRLLVGPK SETLSSGCRT GIPNLLWPPE LWPGEILAQT IYRQRPEPAR 
VSVDQTGMTI TFPEPRPMPT PGQVAAVYSA EGQVLAGAVI EEASHAA