Gene Dbac_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2883 
Symbol 
ID8378575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3265458 
End bp3266321 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID645002115 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003159374 
Protein GI256830646 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.131677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGCG CCGTTGTGCT GGGCGGCAAG ACCGGTCTCT TGGGACAGGC CTTAAGCCTG 
GCTCTGACCA GGCAGGGATG GGCCGTGCAT GCTCCGGGGC GCGATGAGCT GAACCTGTTC
GAGCGCCCGG CCGTGGAGGA CTACCTCGCC CGGACCAAGG CGGAGGTGCT GTTCAACACC
GTGGCCTACA CCAAGGTCGA TCAGGCCGAG GACGAGCCGG CCGAGGCCTC CAGGCTGAAC
CGGCAGCTGC CGCTCATTCT GGGTAAAGCC GTGCAGGCCG CCGGTGTGCC TATGGTCCAC
TACAGCACGG ATTTCGTTTT CAGCGGCAAA AAGACAAGCC CCTATGGCCC CGGGGATCAG
ACCGCGCCCT GTTCGGTCTA CGGCCAGACC AAGTTGCAGG GCGAGCGGGA GCTCATGTCC
CTGGGCCTGC CGAACCTGCT CATCATCCGA ACCTCATGGC TTTTTGGCCC GTGCAAGACA
AATTTCGTGA CCCGCATTCT GGAGCTGGCC GCGTCGAGGC CGGAGCTCTC CGTGGTCCAT
GATCAGATCG GCAGCCCCTC CTACACTCCG GATCTGGCCG CCGGTTCCCT GGCGCTGTTG
GCAACGGGGG CGACGGGCAT CTTTCATCTG GCCAACGCGG GCCAGGCAAG CTGGTGCGAA
CTGGCTACGG AGGCCGTCCG GGGCGCGGAC CTGGCCTGCC GGATCAAGCC CATCCCCTCG
TCCGAATATC CCCAGAAGGC TTGCCGTCCG GCATATTCGG TGCTGGACCT CGGCGCCTTT
ACGGCCGCCA CGGGTATTGC GCCGCGCCCG TGGCTGCAGG CCCTGCGCGA ATTTCTTTTT
TCCCGGGAAG ACTGCTTGTC ATGA
 
Protein sequence
MRSAVVLGGK TGLLGQALSL ALTRQGWAVH APGRDELNLF ERPAVEDYLA RTKAEVLFNT 
VAYTKVDQAE DEPAEASRLN RQLPLILGKA VQAAGVPMVH YSTDFVFSGK KTSPYGPGDQ
TAPCSVYGQT KLQGERELMS LGLPNLLIIR TSWLFGPCKT NFVTRILELA ASRPELSVVH
DQIGSPSYTP DLAAGSLALL ATGATGIFHL ANAGQASWCE LATEAVRGAD LACRIKPIPS
SEYPQKACRP AYSVLDLGAF TAATGIAPRP WLQALREFLF SREDCLS